RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TPPP2P59282 170 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 RPL23AP62750 156 aaKnown RBP15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 RHOGP84095 191 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 KIAA0141Q14154 515 aaPredicted RBP15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 Q5BKY6 102 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 SPANXN5Q5MJ07 72 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 TMEM65Q6PI78 240 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 TMEM14EPQ6UXP3 125 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 NOXA1Q86UR1 476 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 NECAP1Q8NC96 275 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 OR2T35Q8NGX2 323 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 ST6GAL2Q96JF0 529 aa15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 RANGRFQ9HD47 186 aaPredicted RBP15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 STRAPQ9Y3F4 350 aaKnown RBP15.15■□□□□ 0.02
MAP1LC3A-203ENST00000397709 FAM223BA6NKX1 122 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 G3V3Q6 166 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 DEFA5Q01523 94 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 FGL1Q08830 312 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 FAM223AQ8IWN6 122 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 LYRM2Q9NU23 88 aaPredicted RBP15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 THYN1Q9P016 225 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 MBD2Q9UBB5 411 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 FBXL7Q9UJT9 491 aa15.14■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CORTO00230 105 aa15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CCNKO75909 580 aa15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 NDUFB8O95169 186 aa15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 RAB11AP62491 216 aa15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 RNASEH2CQ8TDP1 164 aaKnown RBP15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 MISP3Q96FF7 219 aa15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 USMG5Q96IX5 58 aa15.13■□□□□ 0.01
MAP1LC3A-203ENST00000397709 FAM24AA6NFZ4 105 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 I3L2K1 104 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 K7EIM0 57 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 OR8U8P0C7N1 319 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 P2RY1P47900 373 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 EXOSC2Q13868 293 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 ZNF491Q8N8L2 437 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 C11orf44Q8N8P7 122 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 THAP6Q8TBB0 222 aa15.12■□□□□ 0.01
MAP1LC3A-203ENST00000397709 A0A0G2JLM5 398 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 PMS2P5A8MQ11 134 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 PRSS46E5RG02 174 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 SMLR1H3BR10 107 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 MT-CO2P00403 227 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 IFNA4P05014 189 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 SLC25A4P12235 298 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CAV2P51636 162 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 ATP5G2Q06055 141 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 C15orf32Q32M92 178 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 ETV3LQ6ZN32 361 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 AKAP14Q86UN6 197 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 TCTE3Q8IZS6 198 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 UBE2E2Q96LR5 201 aa15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CITED2Q99967 270 aaPredicted RBP15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 FNDC4Q9H6D8 234 aaPredicted RBP15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 PAIP2BQ9ULR5 123 aaKnown RBP15.11■□□□□ 0.01
MAP1LC3A-203ENST00000397709 TCRBV4S1A1TA0A5B7 111 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 IGSF23A1L1A6 192 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 MFSD2BA6NFX1 497 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 METTL15P1P0C7V9 234 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 HIST2H2BDQ6DRA6 164 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 TMEM252Q8N6L7 170 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 VN1R17PQ8TDU5 208 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 DCUN1D4Q92564 292 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 PINX1Q96BK5 328 aaKnown RBP15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CITED1Q99966 193 aa15.1■□□□□ 0.01
MAP1LC3A-203ENST00000397709 IGHV3-21A0A0B4J1V1 117 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 OPRK1P41145 380 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CDX1P47902 265 aaPredicted RBP15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CD69Q07108 199 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 HAPLN4Q86UW8 402 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 SCARB1Q8WTV0 552 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 CXorf58Q96LI9 332 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 ZNF747Q9BV97 191 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 GNB4Q9HAV0 340 aa15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 TSSC4Q9Y5U2 329 aaPredicted RBP15.09■□□□□ 0.01
MAP1LC3A-203ENST00000397709 TENM1Q9UKZ4 2725 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 RPS10-NUDT3A0A1W2PQS6 291 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 IGHV3-11P01762 117 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 GPX4P36969 197 aaPredicted RBP15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 SULT1A1P50225 295 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 KHDC1LQ5JSQ8 128 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 C12orf54Q6X4T0 127 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 ZNF502Q8TBZ5 544 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 EEF1AKMT3Q96AZ1 226 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 SLC25A31Q9H0C2 315 aa15.08■□□□□ 0
MAP1LC3A-203ENST00000397709 ADARB2-AS1A8MUL3 147 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 SCAF4O95104 1147 aaKnown RBP15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 EWSR1Q01844 656 aaKnown RBP eCLIP15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 ARL16Q0P5N6 197 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 MLANAQ16655 118 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 OR8G2PQ6IF36 304 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 ETFRF1Q6IPR1 90 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 ZNF343Q6P1L6 599 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 C18orf65Q6ZTR6 163 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 SLC16A13Q7RTY0 426 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 STX12Q86Y82 276 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 CCDC140Q96MF4 163 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 MDFIQ99750 246 aa15.07■□□□□ 0
MAP1LC3A-203ENST00000397709 NEURL2Q9BR09 285 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms