RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MMP23AO75900 390 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 IGKV1-16P04430 117 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF90Q03938 601 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RUSC1-AS1Q66K80 236 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 NAV2Q8IVL1 2488 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RNF126Q9BV68 326 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 FAM157CP0CG43 387 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RANP62826 216 aaKnown RBP6.73□□□□□ -1.33
PTPRD-204ENST00000397606 CX3CL1P78423 397 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RELBQ01201 579 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 CD69Q07108 199 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 BTN1A1Q13410 526 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 C10orf55Q5SWW7 151 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 LINC00052Q96N35 136 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 YLPM1P49750 1951 aaKnown RBP6.72□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV3-35A0A0C4DH35 117 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM208Q9BTX3 173 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 ZNRD1Q9P1U0 126 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-204ENST00000397606 ARL3P36405 182 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 MST1LQ2TV78 715 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 CLEC19AQ6UXS0 136 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 C17orf50Q8WW18 174 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 NRGNQ92686 78 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 C5orf42Q9H799 3197 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 LINC00205P59089 165 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF585BQ52M93 769 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 C2orf83Q53S99 150 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 SRSF8Q9BRL6 282 aaKnown RBP6.72□□□□□ -1.33
PTPRD-204ENST00000397606 ELOVL1Q9BW60 279 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 TIMM8BQ9Y5J9 83 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-204ENST00000397606 RNF222A6NCQ9 220 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 HELTA6NFD8 242 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 PPP5D1E7EU14 171 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 OR2C1O95371 312 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 IGFBP2P18065 325 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 HABP2Q14520 560 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-204ENST00000397606 OR10W1Q8NGF6 305 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 S4R3C0 116 aa6.72□□□□□ -1.33
PTPRD-204ENST00000397606 SIAH2O43255 324 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV3-23P01764 117 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 S100A8P05109 93 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 BCL2P10415 239 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 PAX5Q02548 391 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 GUCA2BQ16661 112 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 URGCP-MRPS24S4R325 110 aa6.71□□□□□ -1.33
PTPRD-204ENST00000397606 PSMB11A5LHX3 300 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 DBX1A6NMT0 343 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 H0YIZ8 118 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 IGHV3-11P01762 117 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 PNRC1Q12796 327 aaPredicted RBP6.71□□□□□ -1.34
PTPRD-204ENST00000397606 TMEM249Q2WGJ8 235 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 FAM74A3Q4VXF1 159 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF562Q6V9R5 426 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 OR51M1Q9H341 326 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 TRAV3A0A0B4J244 114 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF134P52741 427 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF137PP52743 207 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 PVRIGQ6DKI7 326 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 EBLN2Q6P2I7 272 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 SSX7Q7RTT5 188 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 SH3BGRL3Q9H299 93 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 LIME1Q9H400 295 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 PSG9Q00887 426 aa6.71□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF600Q6ZNG1 722 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 LINC00305Q7Z4B0 112 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 ZFP82Q8N141 532 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 LRRC75A-AS1Q8N1F1 130 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 NECAP1Q8NC96 275 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 OR11H6Q8NGC7 330 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 DUX5Q96PT3 197 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 LINC00527Q9UJ94 153 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 TFPI2P48307 235 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 DLX1P56177 255 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 FUT9Q9Y231 359 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 OR2T8A6NH00 312 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF705GA8MUZ8 300 aaPredicted RBP6.7□□□□□ -1.34
PTPRD-204ENST00000397606 CHEK1O14757 476 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 SSTP61278 116 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 TFF3Q07654 80 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 TM4SF20Q53R12 229 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 FAM53AQ6NSI3 398 aaPredicted RBP6.7□□□□□ -1.34
PTPRD-204ENST00000397606 RPRMQ9NS64 109 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 FSTL3O95633 263 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 NMBP08949 121 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 MYOD1P15172 320 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 ZP3P21754 424 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 OR10J6PQ8NGY7 276 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 PEMTQ9UBM1 199 aa6.7□□□□□ -1.34
PTPRD-204ENST00000397606 F11RQ9Y624 299 aaKnown RBP6.7□□□□□ -1.34
PTPRD-204ENST00000397606 TCRBV4S1A1TA0A5B7 111 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 PGPA6NDG6 321 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 GATCO43716 136 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms