RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 PMCHL2Q9BQD1 86 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 CDX4O14627 284 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-204ENST00000397545 NBEAP1P0C6P0 100 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 IGHV1-2P23083 117 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 LINC00205P59089 165 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 MYOZ3Q8TDC0 251 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM208Q9BTX3 173 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 ZFP30Q9Y2G7 519 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 CCL21O00585 134 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 TNFSF10P50591 281 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 C2orf83Q53S99 150 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 RPP25LQ8N5L8 163 aaKnown RBP9.01□□□□□ -0.97
CCDC40-204ENST00000397545 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 OCC1Q8TAD7 63 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 ZCCHC14Q8WYQ9 949 aaKnown RBP9.01□□□□□ -0.97
CCDC40-204ENST00000397545 GRAMD2BQ96HH9 432 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 AUP1Q9Y679 476 aa9.01□□□□□ -0.97
CCDC40-204ENST00000397545 TFPI2P48307 235 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 QRFPP83859 136 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 ASCL5Q7RTU5 278 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 COL25A1Q9BXS0 654 aaPredicted RBP9□□□□□ -0.97
CCDC40-204ENST00000397545 COL4A2P08572 1712 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 E9PLN8 166 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 CA1P00915 261 aaPredicted RBP9□□□□□ -0.97
CCDC40-204ENST00000397545 CLDN18P56856 261 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 ZNF146Q15072 292 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 DGAT2L7PQ6IED9 249 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
CCDC40-204ENST00000397545 MALRD1Q5VYJ5 2156 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 CCL3L1P16619 93 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 LHX2P50458 406 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 C18orf15Q96N68 181 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 FRYLO94915 3013 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 NDUFS6O75380 124 aaKnown RBP9□□□□□ -0.97
CCDC40-204ENST00000397545 SELLP14151 372 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
CCDC40-204ENST00000397545 CA7P43166 264 aa9□□□□□ -0.97
CCDC40-204ENST00000397545 PNRC2Q9NPJ4 139 aaKnown RBP9□□□□□ -0.97
CCDC40-204ENST00000397545 H3BVH4 76 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
CCDC40-204ENST00000397545 HLA-DRB1P01911 266 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 IL4P05112 153 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 TAS2R60P59551 318 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 ZNF324BQ6AW86 544 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-204ENST00000397545 HIST3H2BBQ8N257 126 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 NDUFAF3Q9BU61 184 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 IFI27L2Q9H2X8 130 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 FBXL15Q9H469 300 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 COL6A3P12111 3177 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 NUDT3O95989 172 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 AMBPP02760 352 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 GLRXP35754 106 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-204ENST00000397545 LHFPL4Q7Z7J7 247 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 DERL1Q9BUN8 251 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 IGLV3-32A0A0A0MS00 114 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 IFNL4K9M1U5 179 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 LILRA1O75019 489 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 CEACAM1P13688 526 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 ADMP35318 185 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 RPL13AP40429 203 aaKnown RBP8.99□□□□□ -0.97
CCDC40-204ENST00000397545 OR9G1Q8NH87 305 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 SFXN3Q9BWM7 321 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 AP5S1Q9NUS5 200 aa8.99□□□□□ -0.97
CCDC40-204ENST00000397545 LOC102723996A0A087X1L8 192 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 PSPNO60542 156 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 GPX4P36969 197 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-204ENST00000397545 TM4SF20Q53R12 229 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 LEMD1Q68G75 181 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM170AQ8WVE7 144 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 NRN1Q9NPD7 142 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 CSPG4Q6UVK1 2322 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 CCDC168Q8NDH2 2452 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 PPIAL4CA0A0B4J2A2 164 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 IGHV2OR16-5A0A0B4J2B6 119 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 PPIAL4GP0DN37 164 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 JOSD1Q15040 202 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-204ENST00000397545 MST1LQ2TV78 715 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 C1orf174Q8IYL3 243 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 PNKDQ8N490 385 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 HS3ST6Q96QI5 342 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 SELENOKQ9Y6D0 94 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 LY6G6EA0A0G2JKS1 128 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 A0A0G2JRQ6 117 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 H7C2G1 150 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 IGKV1-5P01602 117 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 IGHV3-23P01764 117 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 OR9G9P0C7N8 305 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 CSRP2Q16527 193 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 C9orf106Q8NAJ2 232 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 SEMA5BQ9P283 1151 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 U3KQA8 63 aa8.98□□□□□ -0.97
CCDC40-204ENST00000397545 PYYP10082 97 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms