RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CHRDL1Q9BU40 450 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
SSR1-202ENST00000397511 OTOGLQ3ZCN5 2332 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 MAP1AP78559 2803 aaPredicted RBP4.16□□□□□ -1.74
SSR1-202ENST00000397511 HBZP02008 142 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 PPIAL4GP0DN37 164 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 AZU1P20160 251 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 EDDM3BP56851 147 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 UBE2G1P62253 170 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 TGFBR3Q03167 851 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 ZNF497Q6ZNH5 498 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 BHLHA15Q7RTS1 189 aaPredicted RBP4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM19A2Q8N3H0 131 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 ZNF114Q8NC26 417 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 TSKUQ8WUA8 353 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 SPRY4Q9C004 299 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 KCNIP1Q9NZI2 227 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 KLF13Q9Y2Y9 288 aaPredicted RBP4.16□□□□□ -1.74
SSR1-202ENST00000397511 ABCA1O95477 2261 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 SPTA1P02549 2419 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 TRAV38-1A0A0B4J264 116 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 SPAARA0A1B0GVQ0 90 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A10PA6NDY2 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A18PA6NE21 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A16PA6NEW6 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A20PA6NIJ5 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A8PA6NJQ4 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A7PA6NKC0 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 LINC00473A8K010 186 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A22PA8MWA6 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A12PA8MX19 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A5PA8MXJ8 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A23PA8MXZ1 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A15PP0C7V4 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A13PP0C7W8 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A14PP0C7W9 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 FAM90A24PP0C7X0 464 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 SMIM17P0DL12 118 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 SRIP30626 198 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 SPRNQ5BIV9 151 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 PEAR1Q5VY43 1037 aaPredicted RBP4.16□□□□□ -1.74
SSR1-202ENST00000397511 MMD2Q8IY49 270 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 RNF152Q8N8N0 203 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 ZNRF1Q8ND25 227 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 ZNF439Q8NDP4 499 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 OR2Z1Q8NG97 314 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 OR13A1Q8NGR1 328 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 C5orf30Q96GV9 206 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 TXNDC17Q9BRA2 123 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 DERL1Q9BUN8 251 aa4.16□□□□□ -1.74
SSR1-202ENST00000397511 LIN7CQ9NUP9 197 aaKnown RBP4.16□□□□□ -1.74
SSR1-202ENST00000397511 ZNF292O60281 2723 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 HCFC1P51610 2035 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 C7orf71A4D174 169 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 FAM181BA6NEQ2 426 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 SLC17A3O00476 420 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 SS18L1O75177 396 aaPredicted RBP4.15□□□□□ -1.74
SSR1-202ENST00000397511 HSBP1O75506 76 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 OR10J4P0C629 311 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 SP9P0CG40 484 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 ATP5G3P48201 142 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 RAB9AP51151 201 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 SELENOVP59797 346 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 TBR1Q16650 682 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 KIAA1644Q3SXP7 199 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 NRN1LQ496H8 165 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 MRPL54Q6P161 138 aaKnown RBP4.15□□□□□ -1.74
SSR1-202ENST00000397511 DEFB108BQ8NET1 73 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 OCC1Q8TAD7 63 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 NEUROG1Q92886 237 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 ST6GALNAC6Q969X2 333 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 FER1L6-AS2Q96M78 137 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 HINT2Q9BX68 163 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 POLDIP2Q9Y2S7 368 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 ARL2-SNX15V9GYD0 113 aa4.15□□□□□ -1.74
SSR1-202ENST00000397511 M0R2Z0 102 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 FCGR3BO75015 233 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 HLA-DQA1P01909 254 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 WT1P19544 449 aaPredicted RBP4.15□□□□□ -1.75
SSR1-202ENST00000397511 CA7P43166 264 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 BRWD1-AS2P59051 145 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 PLP1P60201 277 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 CKS1BP61024 79 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 HIST1H1AQ02539 215 aaPredicted RBP4.15□□□□□ -1.75
SSR1-202ENST00000397511 SMAGPQ0VAQ4 97 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 RPL39P5Q59GN2 51 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 UFSP1Q6NVU6 142 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 Q6ZS49 121 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 NEGR1Q7Z3B1 354 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 OR8I2Q8N0Y5 310 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 MDS2Q8NDY4 140 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 STXBP6Q8NFX7 210 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 OR8B3Q8NGG8 313 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 COQ2Q96H96 371 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 OR8B2Q96RD0 313 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 TMEM147Q9BVK8 224 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 GP6Q9HCN6 339 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 GNG12Q9UBI6 72 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 VPS13CQ709C8 3753 aa4.15□□□□□ -1.75
SSR1-202ENST00000397511 PLXNB1O43157 2135 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms