RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 TMEM147Q9BVK8 224 aa9.98□□□□□ -0.81
LMCD1-202ENST00000397386 SMIM3Q9BZL3 60 aa9.98□□□□□ -0.81
LMCD1-202ENST00000397386 WNT10AQ9GZT5 417 aa9.98□□□□□ -0.81
LMCD1-202ENST00000397386 ARV1Q9H2C2 271 aa9.98□□□□□ -0.81
LMCD1-202ENST00000397386 WFDC1Q9HC57 220 aa9.98□□□□□ -0.81
LMCD1-202ENST00000397386 MTORP42345 2549 aa9.98□□□□□ -0.81
LMCD1-202ENST00000397386 AP4M1O00189 453 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 IFNA5P01569 189 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 REG1AP05451 166 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 DEFA4P12838 97 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 BLCAPP62952 87 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 CD69Q07108 199 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 EXOSC2Q13868 293 aaKnown RBP9.97□□□□□ -0.81
LMCD1-202ENST00000397386 RPL7L1Q6DKI1 246 aaKnown RBP9.97□□□□□ -0.81
LMCD1-202ENST00000397386 ETFRF1Q6IPR1 90 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 UNQ5815/PRO19632Q6UWF5 114 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 FAM110DQ8TAY7 271 aaPredicted RBP9.97□□□□□ -0.81
LMCD1-202ENST00000397386 ST8SIA2Q92186 375 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 PHYHIPLQ96FC7 376 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 PRSS22Q9GZN4 317 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 UQCC1Q9NVA1 299 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 LINC01548A6NM66 108 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 TRIM77I1YAP6 450 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 BRI3O95415 125 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 APELAP0DMC3 54 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 MFAP2P55001 183 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 TEX261Q6UWH6 196 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 Q8N2B8 174 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 JMJD8Q96S16 334 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 THYN1Q9P016 225 aa9.97□□□□□ -0.81
LMCD1-202ENST00000397386 IGLV11-55A0A075B6I3 123 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 RPS10-NUDT3A0A1W2PQS6 291 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
LMCD1-202ENST00000397386 MPDU1O75352 247 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 FAM157CP0CG43 387 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 HIST1H1BP16401 226 aaKnown RBP9.96□□□□□ -0.82
LMCD1-202ENST00000397386 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.82
LMCD1-202ENST00000397386 HILS1P60008 231 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 C9orf152Q5JTZ5 239 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 EIF5AL1Q6IS14 154 aaKnown RBP9.96□□□□□ -0.82
LMCD1-202ENST00000397386 GNPNAT1Q96EK6 184 aaPredicted RBP9.96□□□□□ -0.82
LMCD1-202ENST00000397386 GINS3Q9BRX5 216 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 GSX1Q9H4S2 264 aaPredicted RBP9.96□□□□□ -0.82
LMCD1-202ENST00000397386 NPVFQ9HCQ7 196 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 TNFRSF19Q9NS68 423 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 DMRT1Q9Y5R6 373 aa9.96□□□□□ -0.82
LMCD1-202ENST00000397386 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 H3BUA1 57 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 IFNA7P01567 189 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 OPRK1P41145 380 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 IFITM2Q01629 132 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 ECSCRQ19T08 205 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 ARSJQ5FYB0 599 aaPredicted RBP9.95□□□□□ -0.82
LMCD1-202ENST00000397386 SLC25A24Q6NUK1 477 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 SCGB1C1Q8TD33 95 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 WDR61Q9GZS3 305 aaKnown RBP9.95□□□□□ -0.82
LMCD1-202ENST00000397386 WDR83OSQ9Y284 106 aa9.95□□□□□ -0.82
LMCD1-202ENST00000397386 F8P00451 2351 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 MAST4O15021 2626 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 TRBV9A0A0B4J1U6 114 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 I3L2K1 104 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 RGS13O14921 159 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 RNASE1P07998 156 aaKnown RBP9.94□□□□□ -0.82
LMCD1-202ENST00000397386 SEC11BP0C7V7 166 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 PPIFP30405 207 aaKnown RBP9.94□□□□□ -0.82
LMCD1-202ENST00000397386 GAMTQ14353 236 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 SLC16A13Q7RTY0 426 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 TMEM144Q7Z5S9 345 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 TMEM116Q8NCL8 245 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 ZNF680Q8NEM1 530 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 OR5T1Q8NG75 326 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 TAF15Q92804 592 aaKnown RBP eCLIP9.94□□□□□ -0.82
LMCD1-202ENST00000397386 MISP3Q96FF7 219 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 FANCD2OSQ96PS1 177 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 FNDC4Q9H6D8 234 aaPredicted RBP9.94□□□□□ -0.82
LMCD1-202ENST00000397386 ZNF702PQ9H963 129 aa9.94□□□□□ -0.82
LMCD1-202ENST00000397386 LSM4Q9Y4Z0 139 aaKnown RBP9.94□□□□□ -0.82
LMCD1-202ENST00000397386 NSD1Q96L73 2696 aaPredicted RBP9.94□□□□□ -0.82
LMCD1-202ENST00000397386 UBE2L5PA0A1B0GUS4 154 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 G3V318 75 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 SOX15O60248 233 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 CRLF1O75462 422 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 SPP1P10451 314 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 Q6ZS46 218 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 CENPVQ7Z7K6 275 aaPredicted RBP9.93□□□□□ -0.82
LMCD1-202ENST00000397386 SLC35E1Q96K37 410 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 PSMG3Q9BT73 122 aaPredicted RBP9.93□□□□□ -0.82
LMCD1-202ENST00000397386 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
LMCD1-202ENST00000397386 TMEM89A2RUT3 159 aa9.92□□□□□ -0.82
LMCD1-202ENST00000397386 K7EIM0 57 aa9.92□□□□□ -0.82
LMCD1-202ENST00000397386 MT-CO2P00403 227 aa9.92□□□□□ -0.82
LMCD1-202ENST00000397386 CFDP00746 253 aaPredicted RBP9.92□□□□□ -0.82
LMCD1-202ENST00000397386 CFHR3Q02985 330 aa9.92□□□□□ -0.82
LMCD1-202ENST00000397386 AKR1C1Q04828 323 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms