RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 IGHV3-21A0A0B4J1V1 117 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 SMIM30A4D0T7 59 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 MARCH11A6NNE9 402 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 C11orf94C9JXX5 98 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 NUPL2O15504 423 aaKnown RBP6.4□□□□□ -1.38
CAPN3-208ENST00000397204 DFFBO76075 338 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 YIF1AO95070 293 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
CAPN3-208ENST00000397204 GNRHRP30968 328 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 LPAR6P43657 344 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 MFAP4P55083 255 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 FXYD4P59646 89 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 TMEM187Q14656 261 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 SFXN4Q6P4A7 337 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 OR1P1Q8NH06 330 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 OR51H1Q8NH63 302 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 AUNIPQ9H7T9 357 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 PRNDQ9UKY0 176 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 APLNQ9ULZ1 77 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 OR51B2Q9Y5P1 312 aa6.4□□□□□ -1.38
CAPN3-208ENST00000397204 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 DYNC1H1Q14204 4646 aaKnown RBP6.39□□□□□ -1.39
CAPN3-208ENST00000397204 IGHV3OR16-8A0A075B7F1 116 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 TMEM127O75204 238 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 PGLYRP1O75594 196 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-208ENST00000397204 KRASP01116 189 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 HOXA5P20719 270 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 TFPI2P48307 235 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 HSPA13P48723 471 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 HERV-K104P61576 105 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
CAPN3-208ENST00000397204 UBE2UQ5VVX9 321 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 C16orf54Q6UWD8 224 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 LINC00336Q6ZUF6 198 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 TMEM17Q86X19 198 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 CMTM1Q8IZ96 169 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 DUSP18Q8NEJ0 188 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 LGALS14Q8TCE9 139 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 TSC22D3Q99576 134 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 NXF2Q9GZY0 626 aaKnown RBP6.39□□□□□ -1.39
CAPN3-208ENST00000397204 VCX3BQ9H321 246 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 HRH4Q9H3N8 390 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 SSR3Q9UNL2 185 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
CAPN3-208ENST00000397204 TRAV2A0A0B4J234 112 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 C15orf61A6NNL5 157 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 IGLL5B9A064 214 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 I3L2K1 104 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 DNASE2O00115 360 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-208ENST00000397204 CA1P00915 261 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-208ENST00000397204 SDC2P34741 201 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 TCF24Q7RTU0 167 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 GBGT1Q8N5D6 347 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 TSPAN14Q8NG11 270 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 OR5H6Q8NGV6 325 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 FCAMRQ8WWV6 532 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 SLC25A46Q96AG3 418 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 SLC25A38Q96DW6 304 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 ZNF414Q96IQ9 312 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 CNBD2Q96M20 576 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 GINS3Q9BRX5 216 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 FAM212BQ9NTI7 297 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-208ENST00000397204 NSG2Q9Y328 171 aa6.38□□□□□ -1.39
CAPN3-208ENST00000397204 IGKV3-7A0A075B6H7 116 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 IGHV3-49A0A0A0MS15 119 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 DEFB4AO15263 64 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 RLN1P04808 185 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 EIF4EP06730 217 aaKnown RBP6.37□□□□□ -1.39
CAPN3-208ENST00000397204 FCER2P06734 321 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 G6PCP35575 357 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 RFX2P48378 723 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 GABARAPL2P60520 117 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 HSPE1P61604 102 aaKnown RBP6.37□□□□□ -1.39
CAPN3-208ENST00000397204 MXD1Q05195 221 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 TMEM41BQ5BJD5 291 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 SPARTQ8N0X7 666 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 CENPSQ8N2Z9 138 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 SYT8Q8NBV8 401 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 FCGR1BQ92637 280 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 MOB3AQ96BX8 217 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 MS4A6AQ9H2W1 248 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 VSIRQ9H7M9 311 aa6.37□□□□□ -1.39
CAPN3-208ENST00000397204 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 IGHV3-74A0A0B4J1X5 117 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 ANKRD65E5RJM6 399 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 ST8SIA3O43173 380 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 XRCC3O43542 346 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 GNG7O60262 68 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 MT-CO2P00403 227 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 MIFP14174 115 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 PSMB9P28065 219 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 HLA-DMBP28068 263 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 S100GP29377 79 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 NPBWR1P48145 328 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 DEFB131AP59861 70 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms