RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 TMEM190Q8WZ59 177 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 IL22RA2Q969J5 263 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 NEURL2Q9BR09 285 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 TM2D3Q9BRN9 247 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 RTBDNQ9BSG5 229 aaPredicted RBP10.53□□□□□ -0.72
SEC13-204ENST00000397099 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.53□□□□□ -0.72
SEC13-204ENST00000397099 A0A0B4J293 547 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 IZUMO1RA6ND01 250 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 CRYM-AS1A6NIL9 109 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 C15orf62A8K5M9 175 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 I3L2K1 104 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 OR5AC1P0C628 307 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 ANXA3P12429 323 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 NPBWR1P48145 328 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 MFAP2P55001 183 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 SPCS3P61009 180 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 SRPXP78539 464 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 GUCA2BQ16661 112 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 AARDQ4LEZ3 155 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 LAMTOR1Q6IAA8 161 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 RBPMS2Q6ZRY4 209 aaKnown RBP10.52□□□□□ -0.73
SEC13-204ENST00000397099 OR51S1Q8NGJ8 323 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 GLYATL2Q8WU03 294 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 MISP3Q96FF7 219 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 MCUBQ9NWR8 336 aa10.52□□□□□ -0.73
SEC13-204ENST00000397099 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 ST8SIA3O43173 380 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 MT-CO2P00403 227 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 CD5P06127 495 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 BMI1P35226 326 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 HOXA1P49639 335 aaPredicted RBP10.51□□□□□ -0.73
SEC13-204ENST00000397099 SP6Q3SY56 376 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 TM4SF20Q53R12 229 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 FAAP20Q6NZ36 180 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 UNQ9165/PRO28630Q6UXU0 137 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 NOXA1Q86UR1 476 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 UBAC2Q8NBM4 344 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 DUSP18Q8NEJ0 188 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 SPATA25Q9BR10 227 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
SEC13-204ENST00000397099 KMT2CQ8NEZ4 4911 aaKnown RBP10.5□□□□□ -0.73
SEC13-204ENST00000397099 OR11H12B2RN74 326 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 GNG7O60262 68 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 CTSGP08311 255 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 HTR2BP41595 481 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 PYDC2Q56P42 97 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 PVRIGQ6DKI7 326 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 TOMM5Q8N4H5 51 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 OR52B4Q8NGK2 314 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 SPAG8Q99932 426 aaPredicted RBP10.5□□□□□ -0.73
SEC13-204ENST00000397099 MLXQ9UH92 298 aa10.5□□□□□ -0.73
SEC13-204ENST00000397099 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
SEC13-204ENST00000397099 BTNL8Q6UX41 500 aa10.49□□□□□ -0.73
SEC13-204ENST00000397099 SELENOHQ8IZQ5 122 aaKnown RBP10.49□□□□□ -0.73
SEC13-204ENST00000397099 CACNG8Q8WXS5 425 aa10.49□□□□□ -0.73
SEC13-204ENST00000397099 WDR89Q96FK6 387 aaPredicted RBP10.49□□□□□ -0.73
SEC13-204ENST00000397099 OR10C1Q96KK4 312 aa10.49□□□□□ -0.73
SEC13-204ENST00000397099 SLC25A21Q9BQT8 299 aaPredicted RBP10.49□□□□□ -0.73
SEC13-204ENST00000397099 GINS3Q9BRX5 216 aa10.49□□□□□ -0.73
SEC13-204ENST00000397099 CHRDL1Q9BU40 450 aa10.49□□□□□ -0.73
SEC13-204ENST00000397099 RPS10-NUDT3A0A1W2PQS6 291 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 TSPAN4O14817 238 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 ADMP35318 185 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 ETV6P41212 452 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 CMC4P56277 68 aaPredicted RBP10.48□□□□□ -0.73
SEC13-204ENST00000397099 ATP5IP56385 69 aaPredicted RBP10.48□□□□□ -0.73
SEC13-204ENST00000397099 HAGHQ16775 308 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 IZUMO4Q1ZYL8 232 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 LINC00322Q6ZN03 302 aaPredicted RBP10.48□□□□□ -0.73
SEC13-204ENST00000397099 MUC7Q8TAX7 377 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
SEC13-204ENST00000397099 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 RBM38Q9H0Z9 239 aaKnown RBP10.48□□□□□ -0.73
SEC13-204ENST00000397099 NDUFA13Q9P0J0 144 aa10.48□□□□□ -0.73
SEC13-204ENST00000397099 TRAV30A0A087WSZ9 112 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 IGHV3-21A0A0B4J1V1 117 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 A0A0B4J2A0 478 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 IGHV3-35A0A0C4DH35 117 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 DUXBA0A1W2PPF3 345 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 CD7P09564 240 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 SULT1A3P0DMM9 295 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 SULT1A4P0DMN0 295 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 KLF9Q13886 244 aaPredicted RBP10.47□□□□□ -0.73
SEC13-204ENST00000397099 BSXQ3C1V8 233 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 CCDC190Q86UF4 302 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 LGI3Q8N145 548 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
SEC13-204ENST00000397099 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 CITED4Q96RK1 184 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 HIPK2Q9H2X6 1198 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 HEYLQ9NQ87 328 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms