RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
RAPGEF4-201ENST00000397081 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
RAPGEF4-201ENST00000397081 SRSF6Q13247 344 aaKnown RBP12.14□□□□□ -0.47
RAPGEF4-201ENST00000397081 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
RAPGEF4-201ENST00000397081 FLYWCH2Q96CP2 140 aaKnown RBP12.14□□□□□ -0.47
RAPGEF4-201ENST00000397081 HCFC1P51610 2035 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 CDX4O14627 284 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 MOSP00540 346 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 DNLZQ5SXM8 178 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 OR8B2Q96RD0 313 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 WASHC3Q9Y3C0 194 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 CD99P14209 185 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 PLGLAQ15195 96 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 AMMECR1Q9Y4X0 333 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 NAV3Q8IVL0 2385 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 CHEK1O14757 476 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 NPIPB3Q92617 1050 aa12.13□□□□□ -0.47
RAPGEF4-201ENST00000397081 WNT2P09544 360 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 DEFB109BQ30KR1 87 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 GPX1P07203 203 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 KLF3P57682 345 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 LEMD1Q68G75 181 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 SSX8Q7RTT4 187 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 ZPBPQ9BS86 351 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 SH2D7A6NKC9 451 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 IGKV1-16P04430 117 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 TPTE2P1Q5T6R2 138 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 CCL17Q92583 94 aa12.12□□□□□ -0.47
RAPGEF4-201ENST00000397081 S100A7P31151 101 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 TNFAIP6P98066 277 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 C9orf106Q8NAJ2 232 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 ZNF596Q8TC21 504 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 PDLIM4P50479 330 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 LGALS4P56470 323 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 ASCL2Q99929 193 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 PAXXQ9BUH6 204 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 A0A1W2PN81 502 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 Q6ZT83 130 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 LOXL4Q96JB6 756 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 AMY1AP04745 511 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 MRPS18CQ9Y3D5 142 aaKnown RBP12.11□□□□□ -0.47
RAPGEF4-201ENST00000397081 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 C8orf88P0DMB2 117 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 WFDC8Q8IUA0 241 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 Q8TCH9 128 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 FAM168AQ92567 244 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 PARD6GQ9BYG4 376 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 CDC42EP3Q9UKI2 254 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 PGPA6NDG6 321 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 TMEM144Q7Z5S9 345 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 STPG4Q8N801 248 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 TXNDC17Q9BRA2 123 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 RNF114Q9Y508 228 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 PROP1O75360 226 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 SPRNQ5BIV9 151 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 KIR3DL3Q8N743 410 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 FDCSPQ8NFU4 85 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 SARAFQ96BY9 339 aa12.1□□□□□ -0.47
RAPGEF4-201ENST00000397081 LOC400499M0QZD8 3231 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 A0A1W2PS18 150 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 TNXAQ16473 311 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 TP73-AS1Q9UF72 201 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 SERTM2A0A1B0GWG4 89 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 TNFSF4P23510 183 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 SP5Q6BEB4 398 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 BHLHA15Q7RTS1 189 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 SAP30LQ9HAJ7 183 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 PRNDQ9UKY0 176 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 COL6A6A6NMZ7 2263 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 TMSB15BA0A087X1C1 80 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 IGHV2OR16-5A0A0B4J2B6 119 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 KIR2DL5BA0A0G2JN68 375 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 KIR2DL5BA0A0G2JPC4 375 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 KIR2DL5AQ8N109 375 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 DCAF16Q9NXF7 216 aa12.09□□□□□ -0.47
RAPGEF4-201ENST00000397081 MT-ND6P03923 174 aa12.08□□□□□ -0.47
RAPGEF4-201ENST00000397081 FTH1P19P0C7X4 201 aa12.08□□□□□ -0.47
RAPGEF4-201ENST00000397081 ZNF138P52744 262 aa12.08□□□□□ -0.47
RAPGEF4-201ENST00000397081 C22orf15Q8WYQ4 148 aa12.08□□□□□ -0.47
RAPGEF4-201ENST00000397081 TP53TG3Q9ULZ0 132 aa12.08□□□□□ -0.47
RAPGEF4-201ENST00000397081 CCL3L1P16619 93 aa12.08□□□□□ -0.48
RAPGEF4-201ENST00000397081 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms