RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 Q9H3A6 140 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 PTPRQQ9UMZ3 2332 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 CD7P09564 240 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 ATXN7O15265 892 aaPredicted RBP8.79□□□□□ -1
COL4A4-201ENST00000396625 CD8AP01732 235 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 EVI2AP22794 236 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 FAM27BQ5VT28 67 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 GFI1BQ5VTD9 330 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 ITLN1Q8WWA0 313 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 GGTLC1Q9BX51 225 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 PROB1E7EW31 1015 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 TFF3Q07654 80 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 Q6ZS52 159 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 LOC105371242A0A075B767 164 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 GFRA3O60609 400 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 COX6B1P14854 86 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 KIAA0040Q15053 153 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 GAGE2AQ6NT46 116 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 C9orf40Q8IXQ3 194 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 POC1AQ8NBT0 407 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 LINC01565O15544 149 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 PRSS23O95084 383 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 SPINK8P0C7L1 97 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 TTTY12Q9BZ98 90 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 RAMP1O60894 148 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 ADMP35318 185 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 VN1R4Q7Z5H5 301 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 OTOGLQ3ZCN5 2332 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 NBEAP1P0C6P0 100 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 FOXA2Q9Y261 457 aaPredicted RBP8.79□□□□□ -1
COL4A4-201ENST00000396625 PAPPAQ13219 1627 aa8.79□□□□□ -1
COL4A4-201ENST00000396625 LINC00158P58513 81 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 C2orf82Q6UX34 121 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 ZNF826PQ6ZT77 177 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
COL4A4-201ENST00000396625 PTGDSP41222 190 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 ORMDL2Q53FV1 153 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 ABHD12Q8N2K0 398 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 OR9G4Q8NGQ1 327 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 NPIPB3Q92617 1050 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 MGAMO43451 1857 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A10PA6NDY2 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A18PA6NE21 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A16PA6NEW6 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A20PA6NIJ5 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A8PA6NJQ4 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A7PA6NKC0 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A22PA8MWA6 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A12PA8MX19 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A5PA8MXJ8 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A23PA8MXZ1 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 IL6RP08887 468 aaPredicted RBP8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A15PP0C7V4 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A13PP0C7W8 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A14PP0C7W9 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM90A24PP0C7X0 464 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 IL11P20809 199 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 PPIAL4CA0A0B4J2A2 164 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 PPIAL4GP0DN37 164 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 GPR132Q9UNW8 380 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 LAGE3Q14657 143 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 TMEM187Q14656 261 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
COL4A4-201ENST00000396625 EGR1P18146 543 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 TMPRSS3P57727 454 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 FAM57AQ8TBR7 257 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 LOC105371267A0A1B0GV96 52 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 UPK3AO75631 287 aa8.78□□□□□ -1
COL4A4-201ENST00000396625 SCARF2Q96GP6 870 aaPredicted RBP8.78□□□□□ -1
COL4A4-201ENST00000396625 ZFP36L2P47974 494 aaKnown RBP8.77□□□□□ -1
COL4A4-201ENST00000396625 TMEM190Q8WZ59 177 aa8.77□□□□□ -1
COL4A4-201ENST00000396625 GATAD1Q8WUU5 269 aa8.77□□□□□ -1
COL4A4-201ENST00000396625 ATP5J2P56134 94 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 NHSL1Q5SYE7 1610 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 LEPROTO15243 131 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 GTF3AQ92664 365 aaKnown RBP8.77□□□□□ -1.01
COL4A4-201ENST00000396625 NDUFA2O43678 99 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 PSG4Q00888 419 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 RPL39P5Q59GN2 51 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 LOXL4Q96JB6 756 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 C1orf210Q8IVY1 113 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 CHCHD1Q96BP2 118 aaKnown RBP8.77□□□□□ -1.01
COL4A4-201ENST00000396625 PPP1R3EQ9H7J1 279 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 TMEM240Q5SV17 173 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
COL4A4-201ENST00000396625 EGR4Q05215 589 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 TMEM30BQ3MIR4 351 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 DTX2Q86UW9 622 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 SSC4DQ8WTU2 575 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 S4R3C0 116 aa8.77□□□□□ -1.01
COL4A4-201ENST00000396625 IGHV5-10-1A0A0J9YXX1 117 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 SAXO1Q8IYX7 474 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 HS3ST3B1Q9Y662 390 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.76□□□□□ -1.01
COL4A4-201ENST00000396625 OR52E5Q8NH55 327 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 OR9G1Q8NH87 305 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 TMEM186Q96B77 213 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms