RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.49
CBX3-202ENST00000396386 ADIRFQ15847 76 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 ZFP82Q8N141 532 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 MALSU1Q96EH3 234 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 ACY3Q96HD9 319 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 SEPSECSQ9HD40 501 aaKnown RBP12.02□□□□□ -0.49
CBX3-202ENST00000396386 METTL1Q9UBP6 276 aaKnown RBP12.02□□□□□ -0.49
CBX3-202ENST00000396386 PRELID1Q9Y255 219 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 HIVEP3Q5T1R4 2406 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 CEACAM3P40198 252 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
CBX3-202ENST00000396386 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 ZNF114Q8NC26 417 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 RNF5Q99942 180 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 TMEM242Q9NWH2 141 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
CBX3-202ENST00000396386 ODF3BA8MYP8 253 aa12□□□□□ -0.49
CBX3-202ENST00000396386 PRTN3P24158 256 aa12□□□□□ -0.49
CBX3-202ENST00000396386 MLANAQ16655 118 aa12□□□□□ -0.49
CBX3-202ENST00000396386 FAM78BQ5VT40 261 aa12□□□□□ -0.49
CBX3-202ENST00000396386 C2CD4CQ8TF44 421 aa12□□□□□ -0.49
CBX3-202ENST00000396386 C19orf24Q9BVV8 132 aa12□□□□□ -0.49
CBX3-202ENST00000396386 CTDSP1Q9GZU7 261 aa12□□□□□ -0.49
CBX3-202ENST00000396386 SAV1Q9H4B6 383 aaPredicted RBP12□□□□□ -0.49
CBX3-202ENST00000396386 BIN3Q9NQY0 253 aa12□□□□□ -0.49
CBX3-202ENST00000396386 DPM3Q9P2X0 92 aa12□□□□□ -0.49
CBX3-202ENST00000396386 FLNBO75369 2602 aaKnown RBP12□□□□□ -0.49
CBX3-202ENST00000396386 ABCA4P78363 2273 aa12□□□□□ -0.49
CBX3-202ENST00000396386 CLDN34H7C241 214 aa12□□□□□ -0.49
CBX3-202ENST00000396386 TIMM23O14925 209 aa12□□□□□ -0.49
CBX3-202ENST00000396386 REG1AP05451 166 aa12□□□□□ -0.49
CBX3-202ENST00000396386 OR5G3P0C626 314 aa12□□□□□ -0.49
CBX3-202ENST00000396386 EFNA4P52798 201 aa12□□□□□ -0.49
CBX3-202ENST00000396386 RPL23P62829 140 aaKnown RBP12□□□□□ -0.49
CBX3-202ENST00000396386 KLRD1Q13241 179 aa12□□□□□ -0.49
CBX3-202ENST00000396386 ELOBQ15370 118 aa12□□□□□ -0.49
CBX3-202ENST00000396386 ZNF343Q6P1L6 599 aa12□□□□□ -0.49
CBX3-202ENST00000396386 PPP1R27Q86WC6 154 aa12□□□□□ -0.49
CBX3-202ENST00000396386 OR2T6Q8NHC8 308 aa12□□□□□ -0.49
CBX3-202ENST00000396386 Q8WTZ3 238 aa12□□□□□ -0.49
CBX3-202ENST00000396386 FNDC4Q9H6D8 234 aaPredicted RBP12□□□□□ -0.49
CBX3-202ENST00000396386 NBASA2RRP1 2371 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 NDUFS7O75251 213 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 CLN5O75503 358 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 VENTXO95231 258 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 RND2P52198 227 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 GNB1P62873 340 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
CBX3-202ENST00000396386 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
CBX3-202ENST00000396386 HRNRQ86YZ3 2850 aaPredicted RBP11.99□□□□□ -0.49
CBX3-202ENST00000396386 TAS2R45P59539 299 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 PLGLAQ15195 96 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 LDLRAD2Q5SZI1 272 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 PVRIGQ6DKI7 326 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 THAP8Q8NA92 274 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 FBXL15Q9H469 300 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 ARL2-SNX15V9GYD0 113 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 TENM4Q6N022 2769 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 ZNF462Q96JM2 2506 aa11.98□□□□□ -0.49
CBX3-202ENST00000396386 IGHV2-5P01817 119 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 AREGP15514 252 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 NPPCP23582 126 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 GATA2P23769 480 aaPredicted RBP11.97□□□□□ -0.49
CBX3-202ENST00000396386 KIAA0141Q14154 515 aaPredicted RBP11.97□□□□□ -0.49
CBX3-202ENST00000396386 C1orf122Q6ZSJ8 110 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 OR51G1Q8NGK1 321 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 CFHR4Q92496 578 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 RNF2Q99496 336 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
CBX3-202ENST00000396386 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 YTHDF2Q9Y5A9 579 aaKnown RBP11.97□□□□□ -0.49
CBX3-202ENST00000396386 TCRBV4S1A1TA0A5B7 111 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 CORTO00230 105 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 FOXH1O75593 365 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 CXCL1P09341 107 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 VMO1Q7Z5L0 202 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 NPIPB3Q92617 1050 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 MISP3Q96FF7 219 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 HILPDAQ9Y5L2 63 aa11.97□□□□□ -0.49
CBX3-202ENST00000396386 NAV3Q8IVL0 2385 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 TGIF2-C20orf24A0A0A6YYL0 155 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 SELENOTP62341 195 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 SSBP2P81877 361 aaPredicted RBP11.96□□□□□ -0.49
CBX3-202ENST00000396386 MMDQ15546 238 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 PQLC2Q6ZP29 291 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 C16orf82Q7Z2V1 217 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 OR1P1Q8NH06 330 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 SRSF12Q8WXF0 261 aaKnown RBP11.96□□□□□ -0.49
CBX3-202ENST00000396386 DOK5Q9P104 306 aa11.96□□□□□ -0.49
CBX3-202ENST00000396386 SCO2A0A1W2PP80 73 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 NBR2O15453 112 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms