RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MFAP4P55083 255 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 Q56UQ5 140 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 RNASE10Q5GAN6 216 aaKnown RBP10.05□□□□□ -0.8
SCAF11-203ENST00000395453 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 UBAC2Q8NBM4 344 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 C15orf40Q8WUR7 153 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 OR10C1Q96KK4 312 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 EXTL2Q9UBQ6 330 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 SMPXQ9UHP9 88 aa10.05□□□□□ -0.8
SCAF11-203ENST00000395453 KMT2AQ03164 3969 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 IGHV3OR16-8A0A075B7F1 116 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 A0A0B4J293 547 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 CD74P04233 296 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 PI3P19957 117 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 PIGPP57054 158 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 RELQ04864 619 aaPredicted RBP10.04□□□□□ -0.8
SCAF11-203ENST00000395453 IZUMO4Q1ZYL8 232 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 RNASE12Q5GAN4 147 aaKnown RBP10.04□□□□□ -0.8
SCAF11-203ENST00000395453 TMEM229BQ8NBD8 167 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 OR4D10Q8NGI6 311 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 TERB2Q8NHR7 220 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 TP53RKQ96S44 253 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 C20orf24Q9BUV8 137 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 NXF2Q9GZY0 626 aaKnown RBP10.04□□□□□ -0.8
SCAF11-203ENST00000395453 MIXL1Q9H2W2 232 aa10.04□□□□□ -0.8
SCAF11-203ENST00000395453 NUPL2O15504 423 aaKnown RBP10.03□□□□□ -0.8
SCAF11-203ENST00000395453 ZNF207O43670 478 aaKnown RBP10.03□□□□□ -0.8
SCAF11-203ENST00000395453 MT-CO2P00403 227 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 PGAM2P15259 253 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 ALDH3B2P48448 385 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 ERHP84090 104 aaKnown RBP10.03□□□□□ -0.8
SCAF11-203ENST00000395453 ODF3L2Q3SX64 289 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 PVRIGQ6DKI7 326 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 WFDC3Q8IUB2 231 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 ZFAND1Q8TCF1 268 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 MISP3Q96FF7 219 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 TP53TG1Q9Y2A0 90 aa10.03□□□□□ -0.8
SCAF11-203ENST00000395453 IGHV7-4-1A0A0J9YVY3 117 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 C3orf85A0A1B0GTC6 90 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 GABARAPH6UMI1 98 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 CHEK1O14757 476 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 CTSDP07339 412 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-203ENST00000395453 SSBP1Q04837 148 aaKnown RBP10.02□□□□□ -0.81
SCAF11-203ENST00000395453 Q6ZWC4 215 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 RNF2Q99496 336 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 RHPN1-AS1Q9BWJ2 59 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 UBQLN2Q9UHD9 624 aa10.02□□□□□ -0.81
SCAF11-203ENST00000395453 KIR2DL5BA0A0G2JN68 375 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 KIR2DL5BA0A0G2JPC4 375 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 OR4C46A6NHA9 309 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 UBE2CO00762 179 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 CTDSP2O14595 271 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 B3GALNT1O75752 331 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 ATG12O94817 140 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 RAB3DO95716 219 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 IGHV3-48P01763 117 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 UCP1P25874 307 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 APOC4P55056 127 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 TAS2R19P59542 299 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 FAM90A2PQ658T7 463 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 STEAP1BQ6NZ63 245 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 KIR2DL5AQ8N109 375 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 OR13C8Q8NGS7 320 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 KIR2DL5BQ8NHK3 375 aa10.01□□□□□ -0.81
SCAF11-203ENST00000395453 MRPS26Q9BYN8 205 aaKnown RBP10.01□□□□□ -0.81
SCAF11-203ENST00000395453 TRAV14DV4A0A0A6YYC5 116 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 GNG7O60262 68 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 MRPS10P82664 201 aaKnown RBP10□□□□□ -0.81
SCAF11-203ENST00000395453 SPCS2Q15005 226 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 SP6Q3SY56 376 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 AARDQ4LEZ3 155 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 SPINK9Q5DT21 86 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 CCDC71LQ8N9Z2 235 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 MARCH1Q8TCQ1 289 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 COPZ2Q9P299 210 aa10□□□□□ -0.81
SCAF11-203ENST00000395453 A0A0G2JRQ6 117 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 SPRY2O43597 315 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 YIF1AO95070 293 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 CDS2O95674 445 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 TMEM50AO95807 157 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 IFNA17P01571 189 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 RNASE2P10153 161 aaKnown RBP9.99□□□□□ -0.81
SCAF11-203ENST00000395453 SNCAP37840 140 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 ETV6P41212 452 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 NPBWR1P48145 328 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 AKR1C2P52895 323 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 PPP5CP53041 499 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 TNFRSF9Q07011 255 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 TOMM20LQ6UXN7 152 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 Q6ZRM9 215 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 GPR141Q7Z602 305 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 SLC35G3Q8N808 338 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 DUSP18Q8NEJ0 188 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 GLYATL2Q8WU03 294 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 GATAD1Q8WUU5 269 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 PINX1Q96BK5 328 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms