RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PDLIM3Q53GG5 364 aaPredicted RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 KPRPQ5T749 579 aaPredicted RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 OR1L6Q8NGR2 347 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 COQ8AQ8NI60 647 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 ENKURQ8TC29 256 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 SCARB1Q8WTV0 552 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 PINX1Q96BK5 328 aaKnown RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 TMED3Q9Y3Q3 217 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 TRBV7-1A0A0A6YYK4 115 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 MPTX1A8MV57 137 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 IGHV3-48P01763 117 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 CLEC3BP05452 202 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 ARL3P36405 182 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 TNFRSF9Q07011 255 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 VN1R17PQ8TDU5 208 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 HEYLQ9NQ87 328 aaPredicted RBP15.25■□□□□ 0.03
SNCA-203ENST00000394986 HSPB7Q9UBY9 170 aa15.25■□□□□ 0.03
SNCA-203ENST00000394986 PIGBOS1A0A0B4J2F0 54 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 I3L2K1 104 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 PITX3O75364 302 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 OR2C1O95371 312 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 NRARPQ7Z6K4 114 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 RBKSQ9H477 322 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 C21orf62Q9NYP8 219 aa15.24■□□□□ 0.03
SNCA-203ENST00000394986 OR2T8A6NH00 312 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 GGCTO75223 188 aaKnown RBP15.23■□□□□ 0.03
SNCA-203ENST00000394986 SAP30O75446 220 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 MT-CO2P00403 227 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 KRTAP10-11P60412 298 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 BSXQ3C1V8 233 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 C9orf66Q5T8R8 295 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 UBAC2Q8NBM4 344 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 MITD1Q8WV92 249 aa15.23■□□□□ 0.03
SNCA-203ENST00000394986 F8W735 103 aaPredicted RBP15.22■□□□□ 0.03
SNCA-203ENST00000394986 SLC25A6P12236 298 aa15.22■□□□□ 0.03
SNCA-203ENST00000394986 FAM209BQ5JX69 171 aa15.22■□□□□ 0.03
SNCA-203ENST00000394986 ACSM6Q6P461 480 aa15.22■□□□□ 0.03
SNCA-203ENST00000394986 HAPLN4Q86UW8 402 aa15.22■□□□□ 0.03
SNCA-203ENST00000394986 DTD1Q8TEA8 209 aa15.22■□□□□ 0.03
SNCA-203ENST00000394986 GPR61Q9BZJ8 451 aa15.22■□□□□ 0.03
SNCA-203ENST00000394986 IGHV3-35A0A0C4DH35 117 aa15.21■□□□□ 0.03
SNCA-203ENST00000394986 SUB1P53999 127 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNCA-203ENST00000394986 Q56UQ5 140 aa15.21■□□□□ 0.03
SNCA-203ENST00000394986 PVRIGQ6DKI7 326 aa15.21■□□□□ 0.03
SNCA-203ENST00000394986 OR9G4Q8NGQ1 327 aa15.21■□□□□ 0.03
SNCA-203ENST00000394986 ZNF431Q8TF32 576 aaPredicted RBP15.21■□□□□ 0.03
SNCA-203ENST00000394986 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.03
SNCA-203ENST00000394986 MAGT1Q9H0U3 335 aa15.21■□□□□ 0.03
SNCA-203ENST00000394986 CCSO14618 274 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 TGOLN2O43493 480 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 IAPPP10997 89 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 HTR2BP41595 481 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 DEFA1P59665 94 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 DEFA3P59666 94 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 PLET1Q6UQ28 207 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 UXS1Q8NBZ7 420 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 DUSP18Q8NEJ0 188 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 SLC24A4Q8NFF2 622 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 CHRDL1Q9BU40 450 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 DNAH3Q8TD57 4116 aa15.2■□□□□ 0.02
SNCA-203ENST00000394986 IFNA21P01568 189 aa15.19■□□□□ 0.02
SNCA-203ENST00000394986 EDN2P20800 178 aa15.19■□□□□ 0.02
SNCA-203ENST00000394986 IL34Q6ZMJ4 242 aa15.19■□□□□ 0.02
SNCA-203ENST00000394986 HIPK2Q9H2X6 1198 aa15.19■□□□□ 0.02
SNCA-203ENST00000394986 FNDC4Q9H6D8 234 aaPredicted RBP15.19■□□□□ 0.02
SNCA-203ENST00000394986 CACFD1Q9UGQ2 172 aa15.19■□□□□ 0.02
SNCA-203ENST00000394986 WIPF1O43516 503 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 SPNP16150 400 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 EGFEM1PQ0D2K5 195 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 MLANAQ16655 118 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 C2orf83Q53S99 150 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 BSCL2Q96G97 398 aaPredicted RBP15.18■□□□□ 0.02
SNCA-203ENST00000394986 OR10C1Q96KK4 312 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 OR4C12Q96R67 309 aa15.18■□□□□ 0.02
SNCA-203ENST00000394986 IFNA10P01566 189 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 NPY1RP25929 384 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 ADMP35318 185 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 OPRK1P41145 380 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 MFAP4P55083 255 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 TATDN3Q17R31 274 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 C12orf45Q8N5I9 185 aaPredicted RBP15.17■□□□□ 0.02
SNCA-203ENST00000394986 ELOVL1Q9BW60 279 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 AURKAIP1Q9NWT8 199 aaPredicted RBP15.17■□□□□ 0.02
SNCA-203ENST00000394986 MRPL36Q9P0J6 103 aaKnown RBP15.17■□□□□ 0.02
SNCA-203ENST00000394986 ZNF320A2RRD8 509 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 FAM90A26D6RGX4 464 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 CORTO00230 105 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 CSN3P07498 182 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 IAH1Q2TAA2 248 aaPredicted RBP15.17■□□□□ 0.02
SNCA-203ENST00000394986 UNQ9165/PRO28630Q6UXU0 137 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 GPHB5Q86YW7 130 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 OR4D5Q8NGN0 318 aa15.17■□□□□ 0.02
SNCA-203ENST00000394986 INMT-MINDY4F8WBC2 141 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 IL5P05113 134 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 CTSGP08311 255 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 INSL3P51460 131 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 ADAMTSL5Q6ZMM2 481 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 ZNF414Q96IQ9 312 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 PEMTQ9UBM1 199 aa15.16■□□□□ 0.02
SNCA-203ENST00000394986 IGHV3OR16-8A0A075B7F1 116 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms