RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZNF430Q9H8G1 570 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-202ENST00000394888 PITPNC1Q9UKF7 332 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 A0A1W2PPQ1 181 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 FABP4P15090 132 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 C19orf35Q6ZS72 473 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 OR4P4Q8NGL7 312 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 OR1P1Q8NH06 330 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 RAB9BQ9NP90 201 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 SELENOVP59797 346 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 OR2T10Q8NGZ9 312 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 CCL17Q92583 94 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 V9GYV3 84 aa12.38□□□□□ -0.43
CPSF7-202ENST00000394888 IGHV1-8P0DP01 117 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 HIST1H1BP16401 226 aaKnown RBP12.37□□□□□ -0.43
CPSF7-202ENST00000394888 HARBI1Q96MB7 349 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 TXNDC17Q9BRA2 123 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 ARL2-SNX15V9GYD0 113 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 C22orf46C9J442 243 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 C9JCJ5 164 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 PPP1R2P9O14990 202 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 CNTFRP26992 372 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 PRB3Q04118 309 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-202ENST00000394888 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 FAM78BQ5VT40 261 aa12.37□□□□□ -0.43
CPSF7-202ENST00000394888 TRAV5A0A0B4J249 113 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 A0A1W2PPI3 338 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 RHOBP62745 196 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 LCN2P80188 198 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 SCNM1Q9BWG6 230 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 IGLC7A0M8Q6 106 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 NKX6-3A6NJ46 265 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 FAM87AP0C7U9 286 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 GZMBP10144 247 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 OR10J1P30954 320 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
CPSF7-202ENST00000394888 EAF1Q96JC9 268 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-202ENST00000394888 LYNX1G3V0Z9 82 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 ACTL6BO94805 426 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 CRYGCP07315 174 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 LYNX1P0DP58 116 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 IRF2P14316 349 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 S100PP25815 95 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 YPEL3P61236 119 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-202ENST00000394888 RPL8P62917 257 aaKnown RBP12.35□□□□□ -0.43
CPSF7-202ENST00000394888 ZNF90Q03938 601 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 PDPNQ86YL7 162 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 THAP8Q8NA92 274 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 PACRGQ96M98 296 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-202ENST00000394888 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 SLC17A3O00476 420 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 MYCNOSP40205 109 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 LY96Q9Y6Y9 160 aa12.35□□□□□ -0.43
CPSF7-202ENST00000394888 LY6LH3BQJ8 138 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 RD3LP0DJH9 198 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 HNF1AP20823 631 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 ARHGAP32A7KAX9 2087 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 OR5I1Q13606 314 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-202ENST00000394888 OR4A5Q8NH83 315 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 C7orf69Q9H7B7 122 aa12.34□□□□□ -0.43
CPSF7-202ENST00000394888 OR4C13Q8NGP0 309 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 PPP5D1E7EU14 171 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 S100A9P06702 114 aaKnown RBP12.33□□□□□ -0.44
CPSF7-202ENST00000394888 FLYWCH2Q96CP2 140 aaKnown RBP12.33□□□□□ -0.44
CPSF7-202ENST00000394888 VKORC1Q9BQB6 163 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 SPTBN2O15020 2390 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 CELSR2Q9HCU4 2923 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 OR10J4P0C629 311 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-202ENST00000394888 GPX4P36969 197 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-202ENST00000394888 ATP5IP56385 69 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-202ENST00000394888 FBXL19-AS1Q494R0 122 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 TMEM256Q8N2U0 113 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 TMEM186Q96B77 213 aa12.33□□□□□ -0.44
CPSF7-202ENST00000394888 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 DLL1O00548 723 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 ADMP35318 185 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 PSG5Q15238 335 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 ACY3Q96HD9 319 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 FKBP11Q9NYL4 201 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 IGHV1-69-2A0A0G2JMI3 117 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 SELENOTP62341 195 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 FOXC1Q12948 553 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 JOSD1Q15040 202 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-202ENST00000394888 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 TRAV20A0A0B4J274 112 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 CRYBB3P26998 211 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms