RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ACTL10Q5JWF8 245 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 H2BFWTQ7Z2G1 175 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 FAM216AQ8WUB2 273 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 OR5B12Q96R08 314 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 CCL19Q99731 98 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 PATZ1Q9HBE1 687 aaKnown RBP5.64□□□□□ -1.51
RTN4-205ENST00000394609 ONECUT1Q9UBC0 465 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 GAB2Q9UQC2 676 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 CST7O76096 145 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 HPRT1P00492 218 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 HRASP01112 189 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 IFNA5P01569 189 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 IGHV4-39P01824 125 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 P0C879 139 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 COX7A1P24310 79 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 ARF6P62330 175 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 SPINK9Q5DT21 86 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 PDZD11Q5EBL8 140 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 GBGT1Q8N5D6 347 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 TCTEX1D1Q8N7M0 179 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.63□□□□□ -1.51
RTN4-205ENST00000394609 DDB2Q92466 427 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 NRGNQ92686 78 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 RAB40CQ96S21 281 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 SSBP3Q9BWW4 388 aaPredicted RBP5.63□□□□□ -1.51
RTN4-205ENST00000394609 MRPL20Q9BYC9 149 aaKnown RBP5.63□□□□□ -1.51
RTN4-205ENST00000394609 BPESC1Q9GZL8 116 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 TMEM133Q9H2Q1 129 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 POLQO75417 2590 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 DSCAML1Q8TD84 2053 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 TANC2Q9HCD6 1990 aa5.63□□□□□ -1.51
RTN4-205ENST00000394609 USP9YO00507 2555 aaPredicted RBP5.63□□□□□ -1.51
RTN4-205ENST00000394609 LOC105371242A0A075B767 164 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 TRAV3A0A0B4J244 114 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 KBTBD11O94819 623 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 IGKV1-16P04430 117 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 SNRPCP09234 159 aaKnown RBP5.62□□□□□ -1.51
RTN4-205ENST00000394609 OR9G9P0C7N8 305 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 ZFP36P26651 326 aaKnown RBP5.62□□□□□ -1.51
RTN4-205ENST00000394609 THBS3P49746 956 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 PAX9P55771 341 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 RAB11AP62491 216 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 ZNF833PQ6ZTB9 187 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 TMEM217Q8N7C4 229 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 OR5C1Q8NGR4 320 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 OR4S2Q8NH73 311 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 OR9G1Q8NH87 305 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 TMEM208Q9BTX3 173 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.62□□□□□ -1.51
RTN4-205ENST00000394609 TIMM9Q9Y5J7 89 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 TRAV9-1A0A075B6T8 112 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 IGHV2-26A0A0B4J1V2 119 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 MAP1LC3B2A6NCE7 125 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 RBFOX2O43251 390 aaKnown RBP eCLIP5.62□□□□□ -1.51
RTN4-205ENST00000394609 SYNGR2O43760 224 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 LIPFP07098 398 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 ESDP10768 282 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 ZNF25P17030 456 aaPredicted RBP5.62□□□□□ -1.51
RTN4-205ENST00000394609 ERVK-16P61578 105 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 PAFAH1B2P68402 229 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 KCNIP4Q6PIL6 250 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 THNSL2Q86YJ6 484 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 Q8N7P7 452 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 LY6G5BQ8NDX9 201 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 C8orf46Q8TAG6 207 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 IGFBPL1Q8WX77 278 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 ADTRPQ96IZ2 230 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 QTRT1Q9BXR0 403 aaKnown RBP5.62□□□□□ -1.51
RTN4-205ENST00000394609 MAP1LC3BQ9GZQ8 125 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 WNT10AQ9GZT5 417 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 RBKSQ9H477 322 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 SLC35D1Q9NTN3 355 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 FKBP11Q9NYL4 201 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 PTPN13Q12923 2485 aa5.62□□□□□ -1.51
RTN4-205ENST00000394609 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 ARHGAP32A7KAX9 2087 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 IGHV3-72A0A0B4J1Y9 119 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 SRRM4A7MD48 611 aaKnown RBP5.61□□□□□ -1.51
RTN4-205ENST00000394609 ZNF705GA8MUZ8 300 aaPredicted RBP5.61□□□□□ -1.51
RTN4-205ENST00000394609 H7BYZ3 331 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 SOX15O60248 233 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 COX6B1P14854 86 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 KIR2DS2P43631 304 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 DYNLT3P51808 116 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 TMEM267Q0VDI3 215 aaPredicted RBP5.61□□□□□ -1.51
RTN4-205ENST00000394609 RTL8BQ17RB0 113 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 TMEM249Q2WGJ8 235 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 BSXQ3C1V8 233 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 SPANXN5Q5MJ07 72 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 PNKDQ8N490 385 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 ST6GALNAC6Q969X2 333 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 MANBALQ9NQG1 85 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 TMEM140Q9NV12 185 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 PSENENQ9NZ42 101 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 GNG13Q9P2W3 67 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 NAGKQ9UJ70 344 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
RTN4-205ENST00000394609 CSMD2Q7Z408 3487 aa5.61□□□□□ -1.51
RTN4-205ENST00000394609 A0A1W2PRD5 423 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms