RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TCL1AP56279 114 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 RHOBP62745 196 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 MISP3Q96FF7 219 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 LINC00479Q96M42 142 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 PLEKHA3Q9HB20 300 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 RPUSD1Q9UJJ7 312 aaKnown RBP10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 KIR2DS2P43631 304 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 ZNF90Q03938 601 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 LYPD2Q6UXB3 125 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 A8MWP6 167 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 GGTLC3B5MD39 225 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 OR7C2O60412 319 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 RPL29P47914 159 aaKnown RBP10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 LCN2P80188 198 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 RBPJQ06330 500 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 FOXL1Q12952 345 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 ZNF600Q6ZNG1 722 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 PQLC2Q6ZP29 291 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 SLC25A48Q6ZT89 311 aaKnown RBP10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 RITA1Q96K30 269 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 APELAP0DMC3 54 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 TDRG1Q3Y452 100 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 CENPWQ5EE01 88 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
GTF2F1-201ENST00000394456 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 CD99P14209 185 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 IRF2P14316 349 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 IER3P46695 156 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 PRCDQ00LT1 54 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 TPSG1Q9NRR2 321 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 C17orf100A8MU93 164 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 EREGO14944 169 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 SCGB1D1O95968 90 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 REG1AP05451 166 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 RNASE2P10153 161 aaKnown RBP10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 PAX1P15863 534 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 TMEM18Q96B42 140 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 UHRF2Q96PU4 802 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 PLAUP00749 431 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 ERVFC1-1P60608 527 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 SUMO1P63165 101 aaKnown RBP10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 ST6GALNAC3Q8NDV1 305 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 H1FXQ92522 213 aaKnown RBP10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 V9GYV3 84 aa10.93□□□□□ -0.66
GTF2F1-201ENST00000394456 SPTBN1Q01082 2364 aaKnown RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 IGHV3-72A0A0B4J1Y9 119 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 CGB1A6NKQ9 187 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 OR1L6Q8NGR2 347 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 HARBI1Q96MB7 349 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 PYYP10082 97 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 PRB4P10163 310 aaPredicted RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 TMEM200BQ69YZ2 307 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 CCL17Q92583 94 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 IL36BQ9NZH7 164 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 SLC25A10Q9UBX3 287 aaPredicted RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 POLR3KQ9Y2Y1 108 aaPredicted RBP10.92□□□□□ -0.66
GTF2F1-201ENST00000394456 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 FAM90A27PA6NNH2 459 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 ITGB1BP1O14713 200 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 SERF1AO75920 110 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 POU2AF1Q16633 256 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 Q6ZWC4 215 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 MMD2Q8IY49 270 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 C11orf52Q96A22 123 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 VKORC1Q9BQB6 163 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 SAP30LQ9HAJ7 183 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 FKBP11Q9NYL4 201 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 TNFRSF1AP19438 455 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 GRNP28799 593 aaKnown RBP10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 CDKN1AP38936 164 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 RAB31Q13636 194 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 DNLZQ5SXM8 178 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 FAM168AQ92567 244 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
GTF2F1-201ENST00000394456 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 TRAV34A0A0B4J273 112 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 HELTA6NFD8 242 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 H0YJW9 148 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 GCGP01275 180 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 WT1-ASQ06250 92 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 RTL8BQ17RB0 113 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 LINC01560Q8TB33 94 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 MS4A10Q96PG2 267 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 ITPR1Q14643 2758 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 SNURFLB1AK76 121 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 SHISA9B4DS77 424 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 E7EQL1 145 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 FCN1O00602 326 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 GNG4P50150 75 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 YPEL3P61236 119 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms