RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 Q8WTZ3 238 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
GPC3-202ENST00000394299 RPEQ96AT9 228 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 DERL1Q9BUN8 251 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 MANBALQ9NQG1 85 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 TGIF2-C20orf24A0A0A6YYL0 155 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 AREGP15514 252 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 ZFP36P26651 326 aaKnown RBP12.1□□□□□ -0.47
GPC3-202ENST00000394299 PSG5Q15238 335 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 ELOBQ15370 118 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 ADIRFQ15847 76 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 TNXAQ16473 311 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 FBLN7Q53RD9 439 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 FAM78BQ5VT40 261 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 SSBP3Q9BWW4 388 aaPredicted RBP12.1□□□□□ -0.47
GPC3-202ENST00000394299 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 IGHV3-21A0A0B4J1V1 117 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 RAB31Q13636 194 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 RNF212Q495C1 297 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 BEND2Q8NDZ0 799 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 TNFRSF14Q92956 283 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 CHODLQ9H9P2 273 aa12.1□□□□□ -0.47
GPC3-202ENST00000394299 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
GPC3-202ENST00000394299 LGALS7P47929 136 aa12.09□□□□□ -0.47
GPC3-202ENST00000394299 TMEM241Q24JQ0 296 aa12.09□□□□□ -0.47
GPC3-202ENST00000394299 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
GPC3-202ENST00000394299 FLNCQ14315 2725 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 A0A087WWC5 75 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 TIMM23O14925 209 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 CRYGBP07316 175 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 FOLR2P14207 255 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 MFAP2P55001 183 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 PRSS8Q16651 343 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 NPIPB3Q92617 1050 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 METTL1Q9UBP6 276 aaKnown RBP12.08□□□□□ -0.47
GPC3-202ENST00000394299 SIGLEC9Q9Y336 463 aa12.08□□□□□ -0.47
GPC3-202ENST00000394299 YTHDF2Q9Y5A9 579 aaKnown RBP12.08□□□□□ -0.47
GPC3-202ENST00000394299 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
GPC3-202ENST00000394299 A0A1W2PN81 502 aa12.08□□□□□ -0.48
GPC3-202ENST00000394299 PGPEP1LA6NFU8 196 aa12.08□□□□□ -0.48
GPC3-202ENST00000394299 NDUFB4O95168 129 aa12.08□□□□□ -0.48
GPC3-202ENST00000394299 CHRNA7P36544 502 aa12.08□□□□□ -0.48
GPC3-202ENST00000394299 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
GPC3-202ENST00000394299 MAP1AP78559 2803 aaPredicted RBP12.08□□□□□ -0.48
GPC3-202ENST00000394299 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 C1orf196B1AJZ1 125 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 TMEM250H0YL14 139 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 CXorf1O96002 111 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 GCHFRP30047 84 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 GPR6P46095 362 aaPredicted RBP12.07□□□□□ -0.48
GPC3-202ENST00000394299 RPS10P46783 165 aaKnown RBP12.07□□□□□ -0.48
GPC3-202ENST00000394299 ZNF90Q03938 601 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 MORN5Q5VZ52 161 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 TMEM37Q8WXS4 190 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 NAT8Q9UHE5 227 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 AGAP20933 346 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
GPC3-202ENST00000394299 RHOBP62745 196 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 CYP2G1PQ6ZSU1 146 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 TEX45Q8NA69 505 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 DOK5Q9P104 306 aa12.07□□□□□ -0.48
GPC3-202ENST00000394299 UTP20O75691 2785 aaKnown RBP12.06□□□□□ -0.48
GPC3-202ENST00000394299 TRAV5A0A0B4J249 113 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 FNDC10F2Z333 226 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 PNRC1Q12796 327 aaPredicted RBP12.06□□□□□ -0.48
GPC3-202ENST00000394299 CLEC12BQ2HXU8 276 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 PPP1R27Q86WC6 154 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 NECAP1Q8NC96 275 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 MISP3Q96FF7 219 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 RBP4P02753 201 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 RPL27AP46776 148 aaKnown RBP12.06□□□□□ -0.48
GPC3-202ENST00000394299 RAB5BP61020 215 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 LCN2P80188 198 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 ZNF503Q96F45 646 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
GPC3-202ENST00000394299 ZFYVE26Q68DK2 2539 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 SCO2A0A1W2PP80 73 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
GPC3-202ENST00000394299 HTR1DP28221 377 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 MAS1LP35410 378 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 S100A12P80511 92 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 TMEM249Q2WGJ8 235 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 MMD2Q8IY49 270 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 DYNAPQ8N1N2 210 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 SLC25A33Q9BSK2 321 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 IGKV1D-37A0A075B6S9 117 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 B4DEV8 164 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 OR10J4P0C629 311 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 GSX1Q9H4S2 264 aaPredicted RBP12.05□□□□□ -0.48
GPC3-202ENST00000394299 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
GPC3-202ENST00000394299 DPM3Q9P2X0 92 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms