RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LYG2Q86SG7 212 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 COQ8AQ8NI60 647 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 HEYLQ9NQ87 328 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 TMED3Q9Y3Q3 217 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 IGHV3-21A0A0B4J1V1 117 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 FAM240BA0A1B0GVZ2 78 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 K7EIM0 57 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 OR2C1O95371 312 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 DHRS2Q13268 280 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 ASAH1Q13510 395 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 REC114Q7Z4M0 266 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 OR9G4Q8NGQ1 327 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 OR1S1Q8NH92 325 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 SCARB1Q8WTV0 552 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 C20orf85Q9H1P6 137 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 C21orf62Q9NYP8 219 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 TBC1D24Q9ULP9 559 aa14.54□□□□□ -0.08
PDLIM7-204ENST00000393546 NXPH3O95157 252 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 PRB2P02812 416 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 HOXB5P09067 269 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 SLC25A6P12236 298 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 GPR183P32249 361 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 KRTAP10-11P60412 298 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 PLET1Q6UQ28 207 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 GPHB5Q86YW7 130 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 ATP6V0BQ99437 205 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 HIPK2Q9H2X6 1198 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 PEMTQ9UBM1 199 aa14.53□□□□□ -0.08
PDLIM7-204ENST00000393546 TRAV6A0A075B6T7 132 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 I3L2K1 104 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 MT-CO2P00403 227 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 HTR2BP41595 481 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 MFAP4P55083 255 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 TNFRSF9Q07011 255 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 FAM106AQ4KMX7 169 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 PINX1Q96BK5 328 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 AURKAIP1Q9NWT8 199 aaPredicted RBP14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 GAR1Q9NY12 217 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 HSPB7Q9UBY9 170 aa14.52□□□□□ -0.09
PDLIM7-204ENST00000393546 CORTO00230 105 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 H2AFB2P0C5Z0 115 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 Q56UQ5 140 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 GGNBP1Q5YKI7 109 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 PVRIGQ6DKI7 326 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 SPSB3Q6PJ21 355 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 UBAC2Q8NBM4 344 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 BSCL2Q96G97 398 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 TXN2Q99757 166 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 ZC4H2Q9NQZ6 224 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 NUDT15Q9NV35 164 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 DNAH3Q8TD57 4116 aa14.51□□□□□ -0.09
PDLIM7-204ENST00000393546 OR2T8A6NH00 312 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 TGOLN2O43493 480 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 PITX3O75364 302 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 IFNA21P01568 189 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 BSXQ3C1V8 233 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 NOXA1Q86UR1 476 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 RBKSQ9H477 322 aa14.5□□□□□ -0.09
PDLIM7-204ENST00000393546 ZNF320A2RRD8 509 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 LGALS9O00182 355 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 CSN3P07498 182 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 FCGR2BP31994 310 aaPredicted RBP14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 IFITM3Q01628 133 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 C2orf83Q53S99 150 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 IL34Q6ZMJ4 242 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 ENKURQ8TC29 256 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 DTD1Q8TEA8 209 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 MITD1Q8WV92 249 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 SIGLEC8Q9NYZ4 499 aa14.49□□□□□ -0.09
PDLIM7-204ENST00000393546 FAM90A26D6RGX4 464 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 MED6O75586 246 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 ADAP1O75689 374 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 IGHV3-48P01763 117 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 NPBWR1P48145 328 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 DUSP18Q8NEJ0 188 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 SLC24A4Q8NFF2 622 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 OR52B4Q8NGK2 314 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 U3KQ87 197 aa14.48□□□□□ -0.09
PDLIM7-204ENST00000393546 F8W735 103 aaPredicted RBP14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 NUPL2O15504 423 aaKnown RBP14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 IFNA10P01566 189 aa14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 DEFA1P59665 94 aa14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 DEFA3P59666 94 aa14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 CHRDL1Q9BU40 450 aa14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 PALMDQ9NP74 551 aa14.47□□□□□ -0.09
PDLIM7-204ENST00000393546 IGHV3-35A0A0C4DH35 117 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 RPS10-NUDT3A0A1W2PQS6 291 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 WI2-2373I1.2A0A1W2PRP0 233 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 GNG7O60262 68 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 IGLV1-51P01701 117 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 CTSGP08311 255 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 NPY1RP25929 384 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 OPRK1P41145 380 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 ATP5IP56385 69 aaPredicted RBP14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 MRAPQ8TCY5 172 aa14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 RNASEH2CQ8TDP1 164 aaKnown RBP14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 ZNF431Q8TF32 576 aaPredicted RBP14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 ZNF436Q9C0F3 470 aaPredicted RBP14.46□□□□□ -0.09
PDLIM7-204ENST00000393546 ZNF256Q9Y2P7 627 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms