RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FXYD3Q14802 87 aa15.32■□□□□ 0.04
CBX1-202ENST00000393408 WDR73Q6P4I2 378 aa15.32■□□□□ 0.04
CBX1-202ENST00000393408 MRPL20Q9BYC9 149 aaKnown RBP15.32■□□□□ 0.04
CBX1-202ENST00000393408 LINC00312Q9Y6C7 94 aa15.32■□□□□ 0.04
CBX1-202ENST00000393408 PSMB11A5LHX3 300 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 ISLRO14498 428 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 TCAPO15273 167 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 MT-ND6P03923 174 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 RAB4AP20338 218 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 PPOXP50336 477 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 TMEM136Q6ZRR5 245 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 OR5AU1Q8NGC0 362 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 OSR1Q8TAX0 266 aaPredicted RBP15.31■□□□□ 0.04
CBX1-202ENST00000393408 NEU1Q99519 415 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 GNB4Q9HAV0 340 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 NDUFA4L2Q9NRX3 87 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 CDKN1AP38936 164 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 RPL19P84098 196 aaKnown RBP15.31■□□□□ 0.04
CBX1-202ENST00000393408 FAM167A-AS1Q96KT0 104 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 MRPL32Q9BYC8 188 aaKnown RBP15.31■□□□□ 0.04
CBX1-202ENST00000393408 NAT8BQ9UHF3 227 aa15.31■□□□□ 0.04
CBX1-202ENST00000393408 PLCE1Q9P212 2302 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 SPINK4O60575 86 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 IRF2P14316 349 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 CD40P25942 277 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 TDRG1Q3Y452 100 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 CACNG8Q8WXS5 425 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 C20orf144Q9BQM9 153 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 CFAP47Q6ZTR5 3102 aa15.3■□□□□ 0.04
CBX1-202ENST00000393408 DLL1O00548 723 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 FAM27E3Q08E93 113 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 HARBI1Q96MB7 349 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 SLC25A2Q9BXI2 301 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 SAMD10Q9BYL1 202 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 APOA2P02652 100 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 COX19Q49B96 90 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 MORN5Q5VZ52 161 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 IGFL3Q6UXB1 125 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 OR2T6Q8NHC8 308 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 ATG101Q9BSB4 218 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 COMMD5Q9GZQ3 224 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 PARD6AQ9NPB6 346 aa15.29■□□□□ 0.04
CBX1-202ENST00000393408 SMIM27A0A1W2PRY6 76 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 H0YJW9 148 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 CHRNB4P30926 498 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 COMPP49747 757 aaPredicted RBP15.28■□□□□ 0.04
CBX1-202ENST00000393408 TCL1AP56279 114 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 ZNF714Q96N38 554 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 GAL3ST2Q9H3Q3 398 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 TRAV5A0A0B4J249 113 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 INS-IGF2F8WCM5 200 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 RPL8P62917 257 aaKnown RBP15.28■□□□□ 0.04
CBX1-202ENST00000393408 SLC35B1P78383 322 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 TMEM177Q53S58 311 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 IBA57Q5T440 356 aaKnown RBP15.28■□□□□ 0.04
CBX1-202ENST00000393408 OR5AN1Q8NGI8 311 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 RNF2Q99496 336 aa15.28■□□□□ 0.04
CBX1-202ENST00000393408 NKX6-3A6NJ46 265 aa15.27■□□□□ 0.04
CBX1-202ENST00000393408 GPX1P07203 203 aa15.27■□□□□ 0.04
CBX1-202ENST00000393408 TDGF1P3P51864 188 aa15.27■□□□□ 0.04
CBX1-202ENST00000393408 ERHP84090 104 aaKnown RBP15.27■□□□□ 0.04
CBX1-202ENST00000393408 OR10J3Q5JRS4 329 aa15.27■□□□□ 0.04
CBX1-202ENST00000393408 DNAJC4Q9NNZ3 241 aa15.27■□□□□ 0.04
CBX1-202ENST00000393408 E7EUB6 86 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 AMY1AP04745 511 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 MGST1P10620 155 aaKnown RBP15.27■□□□□ 0.03
CBX1-202ENST00000393408 CEACAM8P31997 349 aaPredicted RBP15.27■□□□□ 0.03
CBX1-202ENST00000393408 BRS3P32247 399 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 UBE2L3P68036 154 aaKnown RBP15.27■□□□□ 0.03
CBX1-202ENST00000393408 MEF2CQ06413 473 aaPredicted RBP15.27■□□□□ 0.03
CBX1-202ENST00000393408 IGF2-ASQ6U949 168 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 NUP37Q8NFH4 326 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 VN1R17PQ8TDU5 208 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 FBXL7Q9UJT9 491 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 RNF114Q9Y508 228 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 ASPMQ8IZT6 3477 aa15.27■□□□□ 0.03
CBX1-202ENST00000393408 CCL3L1P16619 93 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 CCL8P80075 99 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 SSBP2P81877 361 aaPredicted RBP15.26■□□□□ 0.03
CBX1-202ENST00000393408 TMEM183BQ1AE95 376 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 KIAA1644Q3SXP7 199 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 SIGLECL1Q8N7X8 197 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 CDC42EP3Q9UKI2 254 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 USF1P22415 310 aaPredicted RBP15.26■□□□□ 0.03
CBX1-202ENST00000393408 ZNF705AQ6ZN79 300 aaPredicted RBP15.26■□□□□ 0.03
CBX1-202ENST00000393408 Q6ZS92 163 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 MIEN1Q9BRT3 115 aa15.26■□□□□ 0.03
CBX1-202ENST00000393408 FCN3O75636 299 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 TMEM167AQ8TBQ9 72 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 FLYWCH2Q96CP2 140 aaKnown RBP15.25■□□□□ 0.03
CBX1-202ENST00000393408 CGB1A6NKQ9 187 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 BMPR1BO00238 502 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 HLA-DQA1P01909 254 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 REG1BP48304 166 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 MRPL54Q6P161 138 aaKnown RBP15.25■□□□□ 0.03
CBX1-202ENST00000393408 MRPL52Q86TS9 123 aaKnown RBP15.25■□□□□ 0.03
CBX1-202ENST00000393408 VAMP8Q9BV40 100 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 SERTAD4Q9NUC0 356 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 PAM16Q9Y3D7 125 aa15.25■□□□□ 0.03
CBX1-202ENST00000393408 A0A1W2PN81 502 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms