RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TRGC2P03986 189 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 TAGLN2P37802 199 aaKnown RBP12.03□□□□□ -0.48
MKS1-202ENST00000393119 RND2P52198 227 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
MKS1-202ENST00000393119 ICAM4Q14773 271 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 SSX2Q16385 188 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 PDPNQ86YL7 162 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 BEND2Q8NDZ0 799 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 OR52E5Q8NH55 327 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 CIB3Q96Q77 187 aaPredicted RBP12.03□□□□□ -0.48
MKS1-202ENST00000393119 BET1LQ9NYM9 111 aa12.03□□□□□ -0.48
MKS1-202ENST00000393119 IGHV4-30-2A0A087WSY4 118 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 PRSS46E5RG02 174 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 HSPB1P04792 205 aaKnown RBP12.02□□□□□ -0.49
MKS1-202ENST00000393119 FGF7P21781 194 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 ATP5J2P56134 94 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 SLC35E3Q7Z769 313 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 NAV3Q8IVL0 2385 aa12.02□□□□□ -0.49
MKS1-202ENST00000393119 TSTD3H0UI37 97 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 RPL8P62917 257 aaKnown RBP12.01□□□□□ -0.49
MKS1-202ENST00000393119 FRZBQ92765 325 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 ZANQ9Y493 2812 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
MKS1-202ENST00000393119 PRTN3P24158 256 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 GNB1P62873 340 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 PDLIM3Q53GG5 364 aaPredicted RBP12.01□□□□□ -0.49
MKS1-202ENST00000393119 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
MKS1-202ENST00000393119 AKR1C8PQ5T2L2 129 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 RUSC1-AS1Q66K80 236 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 SLC24A4Q8NFF2 622 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 OR10G4Q8NGN3 311 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
MKS1-202ENST00000393119 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
MKS1-202ENST00000393119 HIST1H2BLQ99880 126 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 FBXL15Q9H469 300 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 PRNDQ9UKY0 176 aa12.01□□□□□ -0.49
MKS1-202ENST00000393119 SCAF4O95104 1147 aaKnown RBP12□□□□□ -0.49
MKS1-202ENST00000393119 IL3RAP26951 378 aa12□□□□□ -0.49
MKS1-202ENST00000393119 PRCDQ00LT1 54 aa12□□□□□ -0.49
MKS1-202ENST00000393119 TPTE2P1Q5T6R2 138 aa12□□□□□ -0.49
MKS1-202ENST00000393119 LCN15Q6UWW0 184 aa12□□□□□ -0.49
MKS1-202ENST00000393119 TVP23CQ96ET8 276 aa12□□□□□ -0.49
MKS1-202ENST00000393119 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
MKS1-202ENST00000393119 TMEM147Q9BVK8 224 aa12□□□□□ -0.49
MKS1-202ENST00000393119 PLEKHA3Q9HB20 300 aa12□□□□□ -0.49
MKS1-202ENST00000393119 A8MWP6 167 aa12□□□□□ -0.49
MKS1-202ENST00000393119 NPY1RP25929 384 aa12□□□□□ -0.49
MKS1-202ENST00000393119 HTR1DP28221 377 aa12□□□□□ -0.49
MKS1-202ENST00000393119 RAB4BP61018 213 aa12□□□□□ -0.49
MKS1-202ENST00000393119 OR11H6Q8NGC7 330 aa12□□□□□ -0.49
MKS1-202ENST00000393119 COMMD5Q9GZQ3 224 aa12□□□□□ -0.49
MKS1-202ENST00000393119 SIRPDQ9H106 197 aa12□□□□□ -0.49
MKS1-202ENST00000393119 NDUFA4L2Q9NRX3 87 aa12□□□□□ -0.49
MKS1-202ENST00000393119 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
MKS1-202ENST00000393119 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
MKS1-202ENST00000393119 CYB5BO43169 146 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 TGOLN2O43493 480 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 CD1BP29016 333 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 JOSD1Q15040 202 aaPredicted RBP11.99□□□□□ -0.49
MKS1-202ENST00000393119 FAM71F2Q6NXP2 309 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 CYB561D1Q8N8Q1 229 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 TMEM167AQ8TBQ9 72 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 FAM168AQ92567 244 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 TBX15Q96SF7 602 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 NPCDR1Q9BY65 106 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 PRO1933Q9H354 126 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 ENY2Q9NPA8 101 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 SOX21Q9Y651 276 aaPredicted RBP11.99□□□□□ -0.49
MKS1-202ENST00000393119 ABCA1O95477 2261 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 B4DEV8 164 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 M0R1W7 72 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 RBP4P02753 201 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 FABP4P15090 132 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 PDLIM4P50479 330 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 PSG5Q15238 335 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 RPP25LQ8N5L8 163 aaKnown RBP11.99□□□□□ -0.49
MKS1-202ENST00000393119 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
MKS1-202ENST00000393119 DPM3Q9P2X0 92 aa11.99□□□□□ -0.49
MKS1-202ENST00000393119 IGHV2-70DA0A0C4DH43 119 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 MC5RP33032 325 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 SSBP2P81877 361 aaPredicted RBP11.98□□□□□ -0.49
MKS1-202ENST00000393119 PDZD11Q5EBL8 140 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 SSMEM1Q8WWF3 244 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 PINX1Q96BK5 328 aaKnown RBP11.98□□□□□ -0.49
MKS1-202ENST00000393119 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 IGHV3-21A0A0B4J1V1 117 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 TOX4O94842 621 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 AREGP15514 252 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 MDKP21741 143 aaPredicted RBP11.98□□□□□ -0.49
MKS1-202ENST00000393119 TNXAQ16473 311 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 CFHR4Q92496 578 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms