RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RAX2Q96IS3 184 aa11□□□□□ -0.65
LCA5-202ENST00000392959 A0A1B0GW15 77 aa11□□□□□ -0.65
LCA5-202ENST00000392959 YPEL1O60688 119 aa11□□□□□ -0.65
LCA5-202ENST00000392959 PSMG4Q5JS54 123 aa11□□□□□ -0.65
LCA5-202ENST00000392959 MBD3L1Q8WWY6 194 aa11□□□□□ -0.65
LCA5-202ENST00000392959 YPEL2Q96QA6 119 aa11□□□□□ -0.65
LCA5-202ENST00000392959 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
LCA5-202ENST00000392959 LOC102723996A0A087X1L8 192 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 LDLRAD4O15165 306 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 GDF15Q99988 308 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 ORMDL3Q8N138 153 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 WDR83OSQ9Y284 106 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 CACNA1BQ00975 2339 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 GREB1Q4ZG55 1949 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 COLCA2A8K830 154 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 UPK2O00526 184 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 TTC32Q5I0X7 151 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 LINC00469Q8N7U9 141 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 Q9H3A6 140 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 BEX4Q9NWD9 120 aaPredicted RBP10.99□□□□□ -0.65
LCA5-202ENST00000392959 SAA1P0DJI8 122 aaPredicted RBP10.99□□□□□ -0.65
LCA5-202ENST00000392959 ZNF497Q6ZNH5 498 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
LCA5-202ENST00000392959 PRR19A6NJB7 356 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 RAMP3O60896 148 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 SNRPD3P62318 126 aaKnown RBP10.98□□□□□ -0.65
LCA5-202ENST00000392959 SUPT4H1P63272 117 aaKnown RBP10.98□□□□□ -0.65
LCA5-202ENST00000392959 COPS9Q8WXC6 57 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 BRCA1P38398 1863 aaKnown RBP10.98□□□□□ -0.65
LCA5-202ENST00000392959 TRBV24-1A0A075B6N3 115 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 A0A1W2PRE2 83 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 FOXH1O75593 365 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 ZNF883P0CG24 379 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 ADMP35318 185 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 LHX2P50458 406 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 LINC01560Q8TB33 94 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 GPR179Q6PRD1 2367 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 IGKV1-12A0A0C4DH73 117 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 C15orf61A6NNL5 157 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 PPP1R17O96001 155 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 IGKV1D-12P01611 117 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 KIAA2026Q5HYC2 2103 aa10.98□□□□□ -0.65
LCA5-202ENST00000392959 SAA2-SAA4A0A096LPE2 208 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 C9JCJ5 164 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 TRGV3P03979 118 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 SAA2P0DJI9 122 aaPredicted RBP10.97□□□□□ -0.65
LCA5-202ENST00000392959 TMPRSS3P57727 454 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 HIST1H2BLQ99880 126 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 FOXC2Q99958 501 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
LCA5-202ENST00000392959 ATXN7O15265 892 aaPredicted RBP10.97□□□□□ -0.65
LCA5-202ENST00000392959 IGKV1D-33P01593 117 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 IGKV1-33P01594 117 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 IGKV3-20P01619 116 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 LTBRP36941 435 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 MORN2Q502X0 79 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 CEACAM4O75871 244 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 EFEMP2O95967 443 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 CCL3L1P16619 93 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 GPR183P32249 361 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 CRIPAKQ8N1N5 446 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 CHODLQ9H9P2 273 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 DOCK6Q96HP0 2047 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 PATJQ8NI35 1801 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 CRYGSP22914 178 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 MOB4Q9Y3A3 225 aa10.97□□□□□ -0.65
LCA5-202ENST00000392959 ASIPP42127 132 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 ATP5J2P56134 94 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 TEX38Q6PEX7 206 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 GLRX5Q86SX6 157 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 PIMREGQ9BSJ6 248 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 A0A1B0GWB2 263 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 C17orf100A8MU93 164 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 SSBP4Q9BWG4 385 aaPredicted RBP10.96□□□□□ -0.65
LCA5-202ENST00000392959 PLXNA1Q9UIW2 1896 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 COL6A6A6NMZ7 2263 aa10.96□□□□□ -0.65
LCA5-202ENST00000392959 TAF1LQ8IZX4 1826 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 IGHV3OR16-8A0A075B7F1 116 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 IGHV3-66A0A0C4DH42 116 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 SPCS1Q9Y6A9 102 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 C9orf172C9J069 976 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 DUTP33316 252 aaKnown RBP10.96□□□□□ -0.66
LCA5-202ENST00000392959 EMP1P54849 157 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 C9orf106Q8NAJ2 232 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 VSIRQ9H7M9 311 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 DEPPQ9NTK1 212 aa10.96□□□□□ -0.66
LCA5-202ENST00000392959 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 EFNA2O43921 213 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 CD69Q07108 199 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms