RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GPR84Q9NQS5 396 aa-1.92□□□□□ -2.72
RNU6-239P-201ENST00000390990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-1.92□□□□□ -2.72
RNU6-239P-201ENST00000390990 WNK1Q9H4A3 2382 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 TRAV23DV6A0A075B6W5 121 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 A0A0D9SG52 128 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 INMT-MINDY4F8WBC2 141 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 GP1BAP07359 652 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 CXCL2P19875 107 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 SPRR2BP35325 72 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 PEX19P40855 299 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 JOSD1Q15040 202 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 EXOC3L4Q17RC7 722 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 KHDC3LQ587J8 217 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 AHSA2Q719I0 299 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 LINC00523Q86TU6 105 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 OR5A1Q8NGJ0 315 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 OR2T27Q8NH04 317 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 FAM210AQ96ND0 272 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 SCGB3A1Q96QR1 104 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 LYSMD1Q96S90 227 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 MED10Q9BTT4 135 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 CLEC2DQ9UHP7 191 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 MYO3BQ8WXR4 1341 aa-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 EP300Q09472 2414 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-239P-201ENST00000390990 TAF1LQ8IZX4 1826 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 CHD6Q8TD26 2715 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 FLNBO75369 2602 aaKnown RBP-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 TOPBP1Q92547 1522 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 USH2AO75445 5202 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 F5H5K5 113 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 SRP19P09132 144 aaKnown RBP-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 ANXA8P13928 327 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 CXCL3P19876 107 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 UBE2KP61086 200 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 ANXA8L1Q5VT79 327 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 TMEM56Q96MV1 263 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 GINS4Q9BRT9 223 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 TMEM138Q9NPI0 162 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 CADP27708 2225 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 MYO7AQ13402 2215 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 SBF1O95248 1867 aa-1.94□□□□□ -2.72
RNU6-239P-201ENST00000390990 PTPRFP10586 1907 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 METTL15A6NJ78 407 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 JMJD7-PLA2G4BH0Y9G9 81 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 H3BRM9 83 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 TIMM17BO60830 172 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 PPYP01298 95 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 PRM2P04554 102 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 LINC00614P0C842 121 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 LIMS3P0CW19 117 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 LIMS4P0CW20 117 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 RPS24P62847 133 aaKnown RBP-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 BEX3Q00994 111 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 SPINK13Q1W4C9 94 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 C6orf183Q5T699 404 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 ZCCHC23Q6ZST2 131 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 BPIFA4PQ86YQ2 179 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 Q8N402 240 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 CDRT4Q8N9R6 151 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 OR10D3Q8NH80 312 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 SMIM12Q96EX1 92 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 MROQ9BYG7 248 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 LPAR5Q9H1C0 372 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 ANAPC10Q9UM13 185 aa-1.95□□□□□ -2.72
RNU6-239P-201ENST00000390990 A0A1B0GTQ1 180 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 A0A1W2PPV4 95 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 C5orf49A4QMS7 147 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 LIN7AO14910 233 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 OR2B3O76000 313 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 SNX4O95219 450 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 TNFAIP6P98066 277 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 FLOT2Q14254 428 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 PLEKHG7Q6ZR37 379 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 ANKRD36BP1Q96IX9 119 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 AK3Q9UIJ7 227 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 HSPB8Q9UJY1 196 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 NXT1Q9UKK6 140 aaKnown RBP-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 POLR1DQ9Y2S0 133 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 FAT2Q9NYQ8 4349 aa-1.96□□□□□ -2.72
RNU6-239P-201ENST00000390990 PQLC2LA1A4F0 135 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 MBP02144 154 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 SMAGPQ0VAQ4 97 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 EBPQ15125 230 aaKnown RBP-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 C4orf26Q17RF5 130 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 CLVS1Q8IUQ0 354 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 PDCL2Q8N4E4 241 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 LINC00301Q8NCQ3 95 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 OR52E4Q8NGH9 312 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 HAVCR2Q8TDQ0 301 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 EFCAB1Q9HAE3 211 aa-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 NUP153P49790 1475 aaKnown RBP-1.97□□□□□ -2.72
RNU6-239P-201ENST00000390990 VWFP04275 2813 aa-1.97□□□□□ -2.73
RNU6-239P-201ENST00000390990 RTL1A6NKG5 1358 aa-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 TMEM94Q12767 1356 aa-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 KIAA0232Q92628 1395 aa-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 TNS3Q68CZ2 1445 aa-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 FLGP20930 4061 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 TCRBV4S1A1TA0A5B7 111 aa-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 F8W1H4 67 aa-1.98□□□□□ -2.73
RNU6-239P-201ENST00000390990 AZIN1O14977 448 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms