RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 C1orf195Q5TG92 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 IQCF2Q8IXL9 164 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 OR4E2Q8NGC2 313 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BHQ93079 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 BORCS5Q969J3 196 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BNQ99877 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BMQ99879 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 FAT4Q6V0I7 4981 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 SNRNP200O75643 2136 aaKnown RBP0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 UBL3O95164 117 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 SSR2P43308 183 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 UBE2G2P60604 165 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 MLLT11Q13015 90 aaPredicted RBP0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 CLVS2Q5SYC1 327 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 DPPA3Q6W0C5 159 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 SOSTDC1Q6X4U4 206 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 Q6ZS49 121 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 MRPL30Q8TCC3 161 aaKnown RBP0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 SFT2D1Q8WV19 159 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 GINS4Q9BRT9 223 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 ULBP3Q9BZM4 244 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 RASL12Q9NYN1 266 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 TAS2R4Q9NYW5 299 aa0.05□□□□□ -2.4
SNORA40.3-201ENST00000390964 NAV3Q8IVL0 2385 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 TRAV1-1A0A0B4J248 108 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 INMT-MINDY4F8WBC2 141 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 IGKV1-5P01602 117 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 APOEP02649 317 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 NAA20P61599 178 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 RHEBQ15382 184 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 MPV17LQ2QL34 196 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 OR13C4Q8NGS5 318 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 TMEM147Q9BVK8 224 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 MTUS2Q5JR59 1369 aa0.04□□□□□ -2.4
SNORA40.3-201ENST00000390964 TRAV12-1A0A0B4J245 112 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 EVPLLA8MZ36 301 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 LYZL6O75951 148 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 ZNF25P17030 456 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 C1orf137Q5JT78 98 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 LRRN1Q6UXK5 716 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 MIR17HGQ75NE6 70 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 LRRC25Q8N386 305 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 PIGXQ8TBF5 258 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 PATE1Q8WXA2 126 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 CDC42SE1Q9NRR8 79 aa0.03□□□□□ -2.4
SNORA40.3-201ENST00000390964 MUC5ACP98088 5654 aa0.03□□□□□ -2.41
SNORA40.3-201ENST00000390964 CXCR6O00574 342 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 OR2B3O76000 313 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 TCL1BO95988 128 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 CASQ1P31415 396 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 EFNA4P52798 201 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 KHDC3LQ587J8 217 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 BPIFA4PQ86YQ2 179 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 CLVS1Q8IUQ0 354 aaPredicted RBP0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 TMEM156Q8N614 296 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 OR5A1Q8NGJ0 315 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 TERB2Q8NHR7 220 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 C4orf3Q8WVX3 66 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 SCN3AQ9NY46 2000 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 PIK3R4Q99570 1358 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 MED12Q93074 2177 aa0.02□□□□□ -2.41
SNORA40.3-201ENST00000390964 ALPK3Q96L96 1907 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 ZNF736B4DX44 427 aaPredicted RBP0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 SULT1B1O43704 296 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 COX5BP10606 129 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 BLVRAP53004 296 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 RAB5BP61020 215 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 SKP1P63208 163 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 CIRBPQ14011 172 aaKnown RBP0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 OPTNQ96CV9 577 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 NIT2Q9NQR4 276 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 TP73-AS1Q9UF72 201 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 HS3ST2Q9Y278 367 aa0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 PROSCO94903 275 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 KRTAP2-3P0C7H8 128 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 HBA1P69905 142 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 PSG9Q00887 426 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 CACNA1EQ15878 2313 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 RNASE10Q5GAN6 216 aaKnown RBP0□□□□□ -2.41
SNORA40.3-201ENST00000390964 SFXN4Q6P4A7 337 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 TEX261Q6UWH6 196 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 FAM9CQ8IZT9 166 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 SIGLECL1Q8N7X8 197 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 OR10J5Q8NHC4 309 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 RAB8BQ92930 207 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 ITFG2Q969R8 447 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 IMP4Q96G21 291 aaKnown RBP0□□□□□ -2.41
SNORA40.3-201ENST00000390964 KRTAP2-4Q9BYR9 128 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 KRTAP2-1Q9BYU5 128 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 UPF3BQ9BZI7 483 aaKnown RBP0□□□□□ -2.41
SNORA40.3-201ENST00000390964 PLAC8Q9NZF1 115 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 U3KQ87 197 aa0□□□□□ -2.41
SNORA40.3-201ENST00000390964 SYNE1Q8NF91 8797 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 FAM25EA8MYX2 175 aa-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 M0QZ92 97 aa-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 MGST1P10620 155 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 PMAIP1Q13794 54 aa-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 OGFRL1Q5TC84 451 aaPredicted RBP-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 LPCAT4Q643R3 524 aa-0.01□□□□□ -2.41
SNORA40.3-201ENST00000390964 C3orf56Q8N813 242 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms