RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TIMM23O14925 209 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 NDUFS6O75380 124 aaKnown RBP14.59□□□□□ -0.07
ACTN4-202ENST00000390009 OR2C1O95371 312 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 CXorf1O96002 111 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 RPL27AP46776 148 aaKnown RBP14.59□□□□□ -0.07
ACTN4-202ENST00000390009 HCP5Q6MZN7 132 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 PPP1R27Q86WC6 154 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 OR2T6Q8NHC8 308 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 SMIM7Q9BQ49 75 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 SDF2L1Q9HCN8 221 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 ODF3BA8MYP8 253 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 LINC00587B1AMM8 73 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 C11orf94C9JXX5 98 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 MT-ND4LP03901 98 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 REG1AP05451 166 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 ZFP36P26651 326 aaKnown RBP14.59□□□□□ -0.07
ACTN4-202ENST00000390009 SPATA31B1PQ5VZV4 182 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 FAM24BQ8N5W8 94 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 RNF5Q99942 180 aa14.59□□□□□ -0.07
ACTN4-202ENST00000390009 FNDC4Q9H6D8 234 aaPredicted RBP14.59□□□□□ -0.07
ACTN4-202ENST00000390009 B4DEV8 164 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 IGHV2-5P01817 119 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 MAS1LP35410 378 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 CEACAM3P40198 252 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 COMPP49747 757 aaPredicted RBP14.58□□□□□ -0.08
ACTN4-202ENST00000390009 UBE2G2P60604 165 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 ZNF674Q2M3X9 581 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 MRPL41Q8IXM3 137 aaKnown RBP14.58□□□□□ -0.08
ACTN4-202ENST00000390009 RPUSD4Q96CM3 377 aaKnown RBP14.58□□□□□ -0.08
ACTN4-202ENST00000390009 ACY3Q96HD9 319 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 HILPDAQ9Y5L2 63 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 WNK2Q9Y3S1 2297 aa14.58□□□□□ -0.08
ACTN4-202ENST00000390009 C5orf52A6NGY3 159 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 VENTXO95231 258 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 S100A8P05109 93 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 GATA2P23769 480 aaPredicted RBP14.57□□□□□ -0.08
ACTN4-202ENST00000390009 GNB1P62873 340 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 C1orf122Q6ZSJ8 110 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 PARLQ9H300 379 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 FBXL15Q9H469 300 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 UBE2CO00762 179 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 FABP1P07148 127 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 VMO1Q7Z5L0 202 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 LHFPL4Q7Z7J7 247 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 KIR3DL3Q8N743 410 aa14.57□□□□□ -0.08
ACTN4-202ENST00000390009 C1orf196B1AJZ1 125 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 FAM78BQ5VT40 261 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 CST9LP1Q5W188 147 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 CYP2G1PQ6ZSU1 146 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 NAT8Q9UHE5 227 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 A0A1W2PRD5 423 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 A0A1W2PRF3 423 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 A0A1W2PRM7 423 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 OVOL3O00110 214 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 AREGP15514 252 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 ATP5G3P48201 142 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 ZNF114Q8NC26 417 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 CFHR4Q92496 578 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 YPEL4Q96NS1 127 aa14.56□□□□□ -0.08
ACTN4-202ENST00000390009 S100A9P06702 114 aaKnown RBP14.55□□□□□ -0.08
ACTN4-202ENST00000390009 APELAP0DMC3 54 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 GCHFRP30047 84 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 LCN2P80188 198 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 RNF212Q495C1 297 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 MIR17HGQ75NE6 70 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 LINC00469Q8N7U9 141 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 BPESC1Q9GZL8 116 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 GSN-AS1Q9NRJ2 163 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 FUT9Q9Y231 359 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 CACNA1BQ00975 2339 aa14.55□□□□□ -0.08
ACTN4-202ENST00000390009 PDE6DO43924 150 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 FOXH1O75593 365 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 MT-CO2P00403 227 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 IGHV3-48P01763 117 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 S100A6P06703 90 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 SSBP2P81877 361 aaPredicted RBP14.54□□□□□ -0.08
ACTN4-202ENST00000390009 PLGLAQ15195 96 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 TMEM241Q24JQ0 296 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 FAM209BQ5JX69 171 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 PVRIGQ6DKI7 326 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 NPIPB3Q92617 1050 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 MED13LQ71F56 2210 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 FCN1O00602 326 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 RAB5AP20339 215 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 NPPCP23582 126 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 MFAP2P55001 183 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 PAX2Q02962 417 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 MMDQ15546 238 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 OR51G1Q8NGK1 321 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 IGFBPL1Q8WX77 278 aa14.54□□□□□ -0.08
ACTN4-202ENST00000390009 SPTAN1Q13813 2472 aaKnown RBP14.53□□□□□ -0.08
ACTN4-202ENST00000390009 CXorf65A6NEN9 183 aa14.53□□□□□ -0.08
ACTN4-202ENST00000390009 TEX22C9J3V5 150 aa14.53□□□□□ -0.08
ACTN4-202ENST00000390009 KIAA0141Q14154 515 aaPredicted RBP14.53□□□□□ -0.08
ACTN4-202ENST00000390009 SRSF12Q8WXF0 261 aaKnown RBP14.53□□□□□ -0.08
ACTN4-202ENST00000390009 MISP3Q96FF7 219 aa14.53□□□□□ -0.08
ACTN4-202ENST00000390009 TXNDC17Q9BRA2 123 aa14.53□□□□□ -0.08
ACTN4-202ENST00000390009 C19orf24Q9BVV8 132 aa14.53□□□□□ -0.08
ACTN4-202ENST00000390009 MRPL36Q9P0J6 103 aaKnown RBP14.53□□□□□ -0.08
ACTN4-202ENST00000390009 HOXB4P17483 251 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms