RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 CEP350Q5VT06 3117 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 DNM1P46Q6ZS02 220 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 TCF23Q7RTU1 214 aa12.07□□□□□ -0.48
PSME4-201ENST00000389993 DPRXA6NFQ7 191 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 TM4SF5O14894 197 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 PPIFP30405 207 aaKnown RBP12.06□□□□□ -0.48
PSME4-201ENST00000389993 ELOBQ15370 118 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 MLANAQ16655 118 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 FAM162BQ5T6X4 162 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
PSME4-201ENST00000389993 J3QW42 95 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 CORTO00230 105 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 ANOS1P23352 680 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
PSME4-201ENST00000389993 KLHDC1Q8N7A1 406 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 PLSCR2Q9NRY7 297 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 A0A087X0M5 115 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 A0A1B0GX30 115 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 SPATA31B1PQ5VZV4 182 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 SPSB4Q96A44 273 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 UQCRFS1P47985 274 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 ITLN2Q8WWU7 325 aaPredicted RBP12.06□□□□□ -0.48
PSME4-201ENST00000389993 CADP27708 2225 aa12.06□□□□□ -0.48
PSME4-201ENST00000389993 IGKV1D-17A0A075B6S4 117 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 LINC00473A8K010 186 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 TIMP3P35625 211 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 SELENOTP62341 195 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 DIRC3C9JPN6 131 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 CD33P20138 364 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 IGFL4Q6B9Z1 124 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 ELOVL1Q9BW60 279 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 FAM106AQ4KMX7 169 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 NBEAP1P0C6P0 100 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 MAS1LP35410 378 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 TCTEX1D1Q8N7M0 179 aa12.05□□□□□ -0.48
PSME4-201ENST00000389993 YTHDF2Q9Y5A9 579 aaKnown RBP12.05□□□□□ -0.48
PSME4-201ENST00000389993 M0R381 172 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 YPEL1O60688 119 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 CD69Q07108 199 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 C2orf83Q53S99 150 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 OSR1Q8TAX0 266 aaPredicted RBP12.04□□□□□ -0.48
PSME4-201ENST00000389993 YPEL2Q96QA6 119 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 UPK2O00526 184 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
PSME4-201ENST00000389993 PF4P02776 101 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 TRGC1P0CF51 173 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 SCGB1D4Q6XE38 83 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 ZNF502Q8TBZ5 544 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 TMEM178BH3BS89 294 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 Q71RC1 249 aaPredicted RBP12.04□□□□□ -0.48
PSME4-201ENST00000389993 TEX45Q8NA69 505 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 COQ2Q96H96 371 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 ZGRF1Q86YA3 2104 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 E7EQL1 145 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 C21orf62Q9NYP8 219 aa12.04□□□□□ -0.48
PSME4-201ENST00000389993 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 A8MWL6 223 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
PSME4-201ENST00000389993 H7C2G1 150 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 LDLRAD4O15165 306 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 NBR2O15453 112 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 C18orf15Q96N68 181 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.03□□□□□ -0.48
PSME4-201ENST00000389993 QRFPP83859 136 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 PITPNC1Q9UKF7 332 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 C15orf61A6NNL5 157 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 MYOZ3Q8TDC0 251 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 HIST1H2BAQ96A08 127 aa12.03□□□□□ -0.48
PSME4-201ENST00000389993 NSUN5P1Q3KNT7 163 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 Q6ZS92 163 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 OR52E5Q8NH55 327 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.48
PSME4-201ENST00000389993 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 RUSC1-AS1Q66K80 236 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 Q6P435 159 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 GAFA1Q96PS6 74 aa12.02□□□□□ -0.48
PSME4-201ENST00000389993 SSBP4Q9BWG4 385 aaPredicted RBP12.02□□□□□ -0.48
PSME4-201ENST00000389993 CCKARP32238 428 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 GRNP28799 593 aaKnown RBP12.02□□□□□ -0.49
PSME4-201ENST00000389993 HERPUD1Q15011 391 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 ADIPOQQ15848 244 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 CLDND2Q8NHS1 167 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 WDR87Q6ZQQ6 2873 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 CXorf65A6NEN9 183 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 RPL15P61313 204 aaKnown RBP12.02□□□□□ -0.49
PSME4-201ENST00000389993 RRN3P1Q2M238 152 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 SRRM5B3KS81 715 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 PRB1P04280 392 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 NDPQ00604 133 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
PSME4-201ENST00000389993 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
PSME4-201ENST00000389993 A0A1W2PS18 150 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms