RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 NCR2O95944 276 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 PLPPR1Q8TBJ4 325 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 PSMG3Q9BT73 122 aaPredicted RBP13.01□□□□□ -0.33
ALK-201ENST00000389048 TRGV4A0A0C4DH28 118 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
ALK-201ENST00000389048 LAIR2Q6ISS4 152 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 SP9P0CG40 484 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 UCNP55089 124 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 TRIP12Q14669 1992 aaPredicted RBP13.01□□□□□ -0.33
ALK-201ENST00000389048 VENTXO95231 258 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 CA7P43166 264 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 FAM168AQ92567 244 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
ALK-201ENST00000389048 NHSQ6T4R5 1651 aa13□□□□□ -0.33
ALK-201ENST00000389048 IGHMP01871 453 aa13□□□□□ -0.33
ALK-201ENST00000389048 ZNF703Q9H7S9 590 aaPredicted RBP13□□□□□ -0.33
ALK-201ENST00000389048 IGKV2-40A0A087WW87 121 aaPredicted RBP13□□□□□ -0.33
ALK-201ENST00000389048 IGKV2D-40P01614 121 aaPredicted RBP13□□□□□ -0.33
ALK-201ENST00000389048 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
ALK-201ENST00000389048 C5orf30Q96GV9 206 aa13□□□□□ -0.33
ALK-201ENST00000389048 DPM3Q9P2X0 92 aa13□□□□□ -0.33
ALK-201ENST00000389048 GFRA3O60609 400 aa13□□□□□ -0.33
ALK-201ENST00000389048 IGHV1-2P23083 117 aa13□□□□□ -0.33
ALK-201ENST00000389048 VDAC2P45880 294 aaPredicted RBP13□□□□□ -0.33
ALK-201ENST00000389048 RNF182Q8N6D2 247 aa13□□□□□ -0.33
ALK-201ENST00000389048 A0A0G2JK05 382 aa13□□□□□ -0.33
ALK-201ENST00000389048 OR4X2Q8NGF9 303 aa13□□□□□ -0.33
ALK-201ENST00000389048 CD8AP01732 235 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 SLC25A2Q9BXI2 301 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 LY75O60449 1722 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 IGKV1D-13A0A0B4J2D9 117 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
ALK-201ENST00000389048 IGKV1-13P0DP09 117 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 ZNF525Q8N782 197 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 FBLIM1Q8WUP2 373 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 CFHR5Q9BXR6 569 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 OR10W1Q8NGF6 305 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 CARHSP1Q9Y2V2 147 aaKnown RBP12.99□□□□□ -0.33
ALK-201ENST00000389048 CRPP02741 224 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 KBTBD11-OT1A0A1B0GTJ5 212 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 Q6ZT83 130 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 C1orf162Q8NEQ5 155 aaPredicted RBP12.99□□□□□ -0.33
ALK-201ENST00000389048 TMEM167AQ8TBQ9 72 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 MCRIP2Q9BUT9 160 aaKnown RBP12.99□□□□□ -0.33
ALK-201ENST00000389048 CST9LQ9H4G1 147 aa12.99□□□□□ -0.33
ALK-201ENST00000389048 ZNF474Q6S9Z5 364 aaPredicted RBP12.98□□□□□ -0.33
ALK-201ENST00000389048 VGLL1Q99990 258 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 SCRT1Q9BWW7 348 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 IGHV2OR16-5A0A0B4J2B6 119 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 IFNL4K9M1U5 179 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 IGKCP01834 107 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 ADARB2-AS1A8MUL3 147 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 DPM2O94777 84 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 LOXL4Q96JB6 756 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 RNF222A6NCQ9 220 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 CKAP5Q14008 2032 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 CCL20P78556 96 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 PRDM13Q9H4Q3 707 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 GP6Q9HCN6 339 aa12.98□□□□□ -0.33
ALK-201ENST00000389048 PSG7Q13046 419 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 NPIPB13A6NJU9 1138 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 PPP1R32Q7Z5V6 425 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 GTSF1LQ9H1H1 148 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 SLC25A28Q96A46 364 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 LRP5O75197 1615 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 KIAA0100Q14667 2235 aaKnown RBP12.97□□□□□ -0.33
ALK-201ENST00000389048 SNRNP200O75643 2136 aaKnown RBP12.97□□□□□ -0.33
ALK-201ENST00000389048 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
ALK-201ENST00000389048 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 OR9G4Q8NGQ1 327 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 WFDC1Q9HC57 220 aa12.97□□□□□ -0.33
ALK-201ENST00000389048 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
ALK-201ENST00000389048 EDA2RQ9HAV5 297 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 CHCHD2Q9Y6H1 151 aaPredicted RBP12.96□□□□□ -0.33
ALK-201ENST00000389048 A8MXK9 166 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 OR9G9P0C7N8 305 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 RFNGQ9Y644 331 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 ZNF688P0C7X2 276 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 ZXDCQ2QGD7 858 aaPredicted RBP12.96□□□□□ -0.33
ALK-201ENST00000389048 TMEM219Q86XT9 240 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 GTF3AQ92664 365 aaKnown RBP12.96□□□□□ -0.33
ALK-201ENST00000389048 C18orf12Q96KH6 178 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 CITED1Q99966 193 aa12.96□□□□□ -0.33
ALK-201ENST00000389048 IMMP1LQ96LU5 166 aa12.96□□□□□ -0.34
ALK-201ENST00000389048 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
ALK-201ENST00000389048 CIARTQ8N365 385 aaPredicted RBP12.95□□□□□ -0.34
ALK-201ENST00000389048 OCC1Q8TAD7 63 aa12.95□□□□□ -0.34
ALK-201ENST00000389048 M0R2P5 195 aa12.95□□□□□ -0.34
ALK-201ENST00000389048 OCIAD2Q56VL3 154 aa12.95□□□□□ -0.34
ALK-201ENST00000389048 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
ALK-201ENST00000389048 ADAMTSL3P82987 1691 aa12.95□□□□□ -0.34
ALK-201ENST00000389048 PAX1P15863 534 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms