RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 TMEM42Q69YG0 159 aa8.44□□□□□ -1.06
VLDLR-203ENST00000382100 MSRB3Q8IXL7 192 aa8.44□□□□□ -1.06
VLDLR-203ENST00000382100 DEFB108BQ8NET1 73 aa8.44□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE12BA1L429 117 aa8.44□□□□□ -1.06
VLDLR-203ENST00000382100 CCL14Q16627 93 aa8.44□□□□□ -1.06
VLDLR-203ENST00000382100 C8orf82Q6P1X6 216 aaPredicted RBP8.44□□□□□ -1.06
VLDLR-203ENST00000382100 C8orf46Q8TAG6 207 aa8.44□□□□□ -1.06
VLDLR-203ENST00000382100 MAST4O15021 2626 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CEACAM5P06731 702 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 RASL10AQ92737 203 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 RSPO3Q9BXY4 272 aaPredicted RBP8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CCL28Q9NRJ3 127 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 A0A1W2PR80 420 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 J3KT08 172 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 HMGA1P17096 107 aaKnown RBP8.43□□□□□ -1.06
VLDLR-203ENST00000382100 EGR1P18146 543 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CEACAM1P13688 526 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 TM4SF4P48230 202 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 LRRC61Q9BV99 259 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 NEUROG3Q9Y4Z2 214 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 A0A1W2PNR3 127 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 SHISA9B4DS77 424 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CXCL10P02778 98 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 C9orf153Q5TBE3 101 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 FAM90A2PQ658T7 463 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
VLDLR-203ENST00000382100 SHANK3Q9BYB0 1731 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CCL17Q92583 94 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 ANKRD17O75179 2603 aaKnown RBP8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CCL11P51671 97 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 FGF11Q92914 225 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 CST9LQ9H4G1 147 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 MSL2Q9HCI7 577 aa8.43□□□□□ -1.06
VLDLR-203ENST00000382100 RPUSD1Q9UJJ7 312 aaKnown RBP8.43□□□□□ -1.06
VLDLR-203ENST00000382100 LYRM9A8MSI8 78 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 ZNHIT1O43257 154 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 SPRY3O43610 288 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 EVI2AP22794 236 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 LIMS1P48059 325 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 C15orf61A6NNL5 157 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 LYL1P12980 280 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 C3AR1Q16581 482 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 IFITM1P13164 125 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 ASPHD2Q6ICH7 369 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 NPFFR1Q9GZQ6 430 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 CALYQ9NYX4 217 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 F8VVB4 439 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 F8VWA3 439 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 LINC00271P0C7V0 271 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
VLDLR-203ENST00000382100 SELLP14151 372 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE12JA6NER3 117 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 FOXI3A8MTJ6 420 aaPredicted RBP8.42□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE7O76087 117 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 EMDP50402 254 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 GAGE4Q13068 117 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 BCDIN3DQ7Z5W3 292 aaKnown RBP8.42□□□□□ -1.06
VLDLR-203ENST00000382100 FAM214BQ7L5A3 538 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 WFDC6Q9BQY6 131 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 MRPL20Q9BYC9 149 aaKnown RBP8.42□□□□□ -1.06
VLDLR-203ENST00000382100 RNF115Q9Y4L5 304 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 LINC00312Q9Y6C7 94 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 ADAMTS9Q9P2N4 1935 aa8.42□□□□□ -1.06
VLDLR-203ENST00000382100 HAX1O00165 279 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 ATOX1O00244 68 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 LIMS2Q7Z4I7 341 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 C9orf40Q8IXQ3 194 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 TRACP01848 142 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 RASL10BQ96S79 203 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 REG1AP05451 166 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 RND2P52198 227 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 ZIC1Q15915 447 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 KLHDC9Q8NEP7 349 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 R3HDMLQ9H3Y0 253 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 VCYO14598 125 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 GLMPQ8WWB7 406 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 COL9A1P20849 921 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 H3BUT2 72 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 P2RY4P51582 365 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 TRGV8A0A0C4DH27 118 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 DPH3P1Q9H4G8 78 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 CACNG4Q9UBN1 327 aa8.41□□□□□ -1.06
VLDLR-203ENST00000382100 LOC285556D6RIA3 1793 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 GLRXP35754 106 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 RUNX1Q01196 453 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 C21orf62Q9NYP8 219 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 FOXC2Q99958 501 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 BHLHA9Q7RTU4 235 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 MRPS18CQ9Y3D5 142 aaKnown RBP8.4□□□□□ -1.06
VLDLR-203ENST00000382100 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
VLDLR-203ENST00000382100 ZIC4Q8N9L1 334 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms