RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 K7EIM0 57 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 LY86O95711 162 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 TMEM50AO95807 157 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 SCGB1D2O95969 90 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 IFNA10P01566 189 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
PDGFB-202ENST00000381551 IAPPP10997 89 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 CXCL3P19876 107 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 PAX9P55771 341 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 FCN2Q15485 313 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 VN1R17PQ8TDU5 208 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 SCARB1Q8WTV0 552 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 WDR89Q96FK6 387 aaPredicted RBP11.96□□□□□ -0.49
PDGFB-202ENST00000381551 SMIM8Q96KF7 97 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 CXorf58Q96LI9 332 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 NMES1Q9C002 83 aa11.96□□□□□ -0.49
PDGFB-202ENST00000381551 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 M0QZ24 198 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 SSSCA1O60232 199 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 CYCSP99999 105 aaKnown RBP11.95□□□□□ -0.5
PDGFB-202ENST00000381551 NOXA1Q86UR1 476 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 OR11H7Q8NGC8 314 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 MISP3Q96FF7 219 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 RAB40CQ96S21 281 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 RCL1Q9Y2P8 373 aaKnown RBP11.95□□□□□ -0.5
PDGFB-202ENST00000381551 S4R3C0 116 aa11.95□□□□□ -0.5
PDGFB-202ENST00000381551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
PDGFB-202ENST00000381551 MFSD2BA6NFX1 497 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 K7EPK0 472 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 CORTO00230 105 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 MT-CO2P00403 227 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 NPY1RP25929 384 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 RRAS2P62070 204 aaPredicted RBP11.94□□□□□ -0.5
PDGFB-202ENST00000381551 RAB32Q13637 225 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 EXOSC2Q13868 293 aaKnown RBP11.94□□□□□ -0.5
PDGFB-202ENST00000381551 MLANAQ16655 118 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 Q6ZNX1 250 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 OR4F17Q8NGA8 305 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 OR1N2Q8NGR9 330 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 ZNF502Q8TBZ5 544 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 EEF1AKMT3Q96AZ1 226 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 PINX1Q96BK5 328 aaKnown RBP11.94□□□□□ -0.5
PDGFB-202ENST00000381551 RAX2Q96IS3 184 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 OR4F4Q96R69 305 aa11.94□□□□□ -0.5
PDGFB-202ENST00000381551 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
PDGFB-202ENST00000381551 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
PDGFB-202ENST00000381551 TRBV7-1A0A0A6YYK4 115 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 IGHV3-21A0A0B4J1V1 117 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 ANKRD34BA5PLL1 514 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 C15orf62A8K5M9 175 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 CCL24O00175 119 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 HSPB1P04792 205 aaKnown RBP11.93□□□□□ -0.5
PDGFB-202ENST00000381551 CLEC3BP05452 202 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 MYCNOSP40205 109 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 TAS2R30P59541 319 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 RPP30P78346 268 aaKnown RBP11.93□□□□□ -0.5
PDGFB-202ENST00000381551 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
PDGFB-202ENST00000381551 CCDC140Q96MF4 163 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 RANGRFQ9HD47 186 aaPredicted RBP11.93□□□□□ -0.5
PDGFB-202ENST00000381551 PSENENQ9NZ42 101 aa11.93□□□□□ -0.5
PDGFB-202ENST00000381551 TSPAN15O95858 294 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 RAB11AP62491 216 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 FNDC4Q9H6D8 234 aaPredicted RBP11.92□□□□□ -0.5
PDGFB-202ENST00000381551 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
PDGFB-202ENST00000381551 STRAPQ9Y3F4 350 aaKnown RBP11.92□□□□□ -0.5
PDGFB-202ENST00000381551 VWFP04275 2813 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 IGHV4OR15-8A0A075B7B6 117 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 A0A087WW49 117 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
PDGFB-202ENST00000381551 H3BP45 60 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 TSC22D2O75157 780 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 IGHV3-48P01763 117 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 IFNA4P05014 189 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 FCGR2BP31994 310 aaPredicted RBP11.91□□□□□ -0.5
PDGFB-202ENST00000381551 S100A10P60903 97 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 FHL3Q13643 280 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 FAM209BQ5JX69 171 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 DPF1Q92782 380 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 ATP6V0BQ99437 205 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 TXN2Q99757 166 aa11.91□□□□□ -0.5
PDGFB-202ENST00000381551 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
PDGFB-202ENST00000381551 LINC01619G3V211 115 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 H0YIZ8 118 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 L7N2F9 121 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
PDGFB-202ENST00000381551 GPX4P36969 197 aaPredicted RBP11.9□□□□□ -0.5
PDGFB-202ENST00000381551 OPRK1P41145 380 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 MFAP4P55083 255 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms