RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 LYPD2Q6UXB3 125 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 NHLRC2Q8NBF2 726 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 RNF166Q96A37 237 aaPredicted RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 TLN1Q9Y490 2541 aaKnown RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 KIAA1549LQ6ZVL6 1849 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 NBEAP1P0C6P0 100 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 NPPCP23582 126 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 COL8A2P25067 703 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 MAS1LP35410 378 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 GPX4P36969 197 aaPredicted RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 LINC00205P59089 165 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 IQCJQ1A5X6 159 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 OR52E5Q8NH55 327 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 WDR83OSQ9Y284 106 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 SMAD7O15105 426 aaKnown RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 SRP19P09132 144 aaKnown RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 RAB9AP51151 201 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 ANAPC10Q9UM13 185 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 FGF16O43320 207 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 RELQ04864 619 aaPredicted RBP10.09□□□□□ -0.79
GABPB1-203ENST00000380877 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
GABPB1-203ENST00000380877 ERVK11-1P61568 191 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 CD69Q07108 199 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 HTN1P15515 57 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 ZNF738Q8NE65 137 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 TRGC2P03986 189 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 AGAP20933 346 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 GATA4P43694 442 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 OR10W1Q8NGF6 305 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 CLDND2Q8NHS1 167 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 DCAF16Q9NXF7 216 aa10.09□□□□□ -0.79
GABPB1-203ENST00000380877 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 TEX50A0A1B0GTY4 177 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 CXorf65A6NEN9 183 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 GPR183P32249 361 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 SRSF4Q08170 494 aaKnown RBP10.08□□□□□ -0.8
GABPB1-203ENST00000380877 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 MIR17HGQ75NE6 70 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 EIF4E3Q8N5X7 224 aaKnown RBP10.08□□□□□ -0.8
GABPB1-203ENST00000380877 PRR14LQ5THK1 2151 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 CGB1A6NKQ9 187 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 SLC25A48Q6ZT89 311 aaKnown RBP10.08□□□□□ -0.8
GABPB1-203ENST00000380877 ZNF383Q8NA42 475 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 ZNF257Q9Y2Q1 563 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-203ENST00000380877 A0A0G2JRQ6 117 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 APCSP02743 223 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 TM4SF20Q53R12 229 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 SLC25A33Q9BSK2 321 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 TMEM8BA6NDV4 472 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 DLX6P56179 175 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
GABPB1-203ENST00000380877 DOCK11Q5JSL3 2073 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 IGLV3-9A0A075B6K5 115 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 TRAV3A0A0B4J244 114 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 C10orf142B7Z368 130 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 PSG9Q00887 426 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 TMEM177Q53S58 311 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 CENPVQ7Z7K6 275 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-203ENST00000380877 SLX1AQ9BQ83 275 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 ATP5G3P48201 142 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 ZNF343Q6P1L6 599 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 Q6ZRM9 215 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 IGHV3OR16-8A0A075B7F1 116 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 IGHV3-49A0A0A0MS15 119 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 MT-ND6P03923 174 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 RPL29P47914 159 aaKnown RBP10.07□□□□□ -0.8
GABPB1-203ENST00000380877 KLRD1Q13241 179 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 ICAM4Q14773 271 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 TGIF2-C20orf24A0A0A6YYL0 155 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 TRAV40A0A0B4J280 105 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 WIPF3A6NGB9 483 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 VENTXO95231 258 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 LIME1Q9H400 295 aa10.07□□□□□ -0.8
GABPB1-203ENST00000380877 TMEM131Q92545 1883 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 IGHV1-3A0A0C4DH29 117 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 TMEM14EPQ6UXP3 125 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
GABPB1-203ENST00000380877 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 CEP295Q9C0D2 2601 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 OR2T8A6NH00 312 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 PRSS8Q16651 343 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 ZNF585BQ52M93 769 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 RBPMS2Q6ZRY4 209 aaKnown RBP10.06□□□□□ -0.8
GABPB1-203ENST00000380877 HIST1H2BAQ96A08 127 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 DENND4AQ7Z401 1863 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 CSPG4Q6UVK1 2322 aa10.06□□□□□ -0.8
GABPB1-203ENST00000380877 M0R2Z0 102 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms