RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 COMPP49747 757 aaPredicted RBP13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 GNG4P50150 75 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 PRB3Q04118 309 aaPredicted RBP13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 UHRF2Q96PU4 802 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 NABP2Q9BQ15 211 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 SCNM1Q9BWG6 230 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 ENY2Q9NPA8 101 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 FBXL7Q9UJT9 491 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 NAV3Q8IVL0 2385 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 TRGV10A0A0A0MS01 117 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 BATFQ16520 125 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 H1FXQ92522 213 aaKnown RBP13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 FOXA2Q9Y261 457 aaPredicted RBP13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 C16orf97H3BN30 126 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 ZNF25P17030 456 aaPredicted RBP13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 OR5AU1Q8NGC0 362 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 OR9G1Q8NH87 305 aa13.26□□□□□ -0.29
NKX3-1-201ENST00000380871 HELTA6NFD8 242 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 MRPS11P82912 194 aaKnown RBP13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 PRR31Q5SQ13 230 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 OR10W1Q8NGF6 305 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 NEUROG1Q92886 237 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 SFXN3Q9BWM7 321 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 DPRXA6NFQ7 191 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 C9JCJ5 164 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 CGB3P0DN86 165 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 CGB7P0DN87 165 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 REG1BP48304 166 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 KRTDAPP60985 99 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 BSPH1Q075Z2 132 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 CR1LQ2VPA4 569 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 MRPL54Q6P161 138 aaKnown RBP13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 LINC00479Q96M42 142 aa13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 RALYQ9UKM9 306 aaKnown RBP13.25□□□□□ -0.29
NKX3-1-201ENST00000380871 J3QR06 171 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 FOSL1P15407 271 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 TNFSF4P23510 183 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 SLC45A2Q9UMX9 530 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 RAB31Q13636 194 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 TUBG2Q9NRH3 451 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 IGHV3-48P01763 117 aa13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 SUMO1P63165 101 aaKnown RBP13.24□□□□□ -0.29
NKX3-1-201ENST00000380871 RAI1Q7Z5J4 1906 aaPredicted RBP13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 MT-CO2P00403 227 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 CCL3L1P16619 93 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 CEACAM8P31997 349 aaPredicted RBP13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 SPACA3Q8IXA5 215 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 SPTBN4Q9H254 2564 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 KBTBD11-OT1A0A1B0GTJ5 212 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 A0A1B0GWJ7 208 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 AREGP15514 252 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 PMCHP20382 165 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 PAFAH1B2P68402 229 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 PLXNB1O43157 2135 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
NKX3-1-201ENST00000380871 TANC2Q9HCD6 1990 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 ESDP10768 282 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 KIR2DS2P43631 304 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 RANP62826 216 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 SSBP2P81877 361 aaPredicted RBP13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 FAM168AQ92567 244 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 SSBP3Q9BWW4 388 aaPredicted RBP13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 TBL2Q9Y4P3 447 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 SPTBN1Q01082 2364 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 TMEM136Q6ZRR5 245 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 IL19Q9UHD0 177 aa13.22□□□□□ -0.29
NKX3-1-201ENST00000380871 ABCA1O95477 2261 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 LHBP01229 141 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 IGLV2-8P01709 118 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 RAB7AP51149 207 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 DLX1P56177 255 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 Q8N976 141 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 Q8NA96 180 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 MIEN1Q9BRT3 115 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 CHODLQ9H9P2 273 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 AKAP6Q13023 2319 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 IGLV3-9A0A075B6K5 115 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 CT45A6P0DMU7 189 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 CT45A5P0DMU8 189 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 CT45A7P0DMV0 189 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 GAFA1Q96PS6 74 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 PPIAL4AQ9Y536 164 aa13.21□□□□□ -0.29
NKX3-1-201ENST00000380871 TACC2O95359 2948 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 DYSFO75923 2080 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 GPX1P07203 203 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 CX3CL1P78423 397 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 TMEM183BQ1AE95 376 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms