RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 M0QZK8 103 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 GGCTO75223 188 aaKnown RBP10.25□□□□□ -0.77
VPS16-202ENST00000380445 GCGP01275 180 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 MYOD1P15172 320 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 REG1BP48304 166 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 RND2P52198 227 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 ERVFC1-1P60608 527 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 RHOBP62745 196 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 RBX1P62877 108 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 GCSAMLQ5JQS6 135 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 TMEM167AQ8TBQ9 72 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
VPS16-202ENST00000380445 PARLQ9H300 379 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 MT-CO2P00403 227 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 AMBPP02760 352 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 OPN1MWP04001 364 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 OPN1MW2P0DN77 364 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 OPN1MW3P0DN78 364 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 HNF1AP20823 631 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 PRRX1P54821 245 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 BSXQ3C1V8 233 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 TMEM183AQ8IXX5 376 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 NDUFA4L2Q9NRX3 87 aa10.25□□□□□ -0.77
VPS16-202ENST00000380445 F6UZH7 168 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 TGOLN2O43493 480 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 TCF21O43680 179 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 DEFA4P12838 97 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 ADORA2A-AS1P86434 159 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 ADIRFQ15847 76 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 VMA21Q3ZAQ7 101 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 STPG3Q8N7X2 389 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 GATAD1Q8WUU5 269 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 SSMEM1Q8WWF3 244 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 ARFGEF3Q5TH69 2177 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 ROS1P08922 2347 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 VENTXO95231 258 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 COL8A2P25067 703 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 GRNP28799 593 aaKnown RBP10.24□□□□□ -0.77
VPS16-202ENST00000380445 LGALS7P47929 136 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 CACNG8Q8WXS5 425 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 C1orf159Q96HA4 380 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 RAB1BQ9H0U4 201 aa10.24□□□□□ -0.77
VPS16-202ENST00000380445 RBP4P02753 201 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 SUB1P53999 127 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS16-202ENST00000380445 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 POLEQ07864 2286 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 SIAH2O43255 324 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 ARL14EPLP0DKL9 152 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 RNASE2P10153 161 aaKnown RBP10.23□□□□□ -0.77
VPS16-202ENST00000380445 C11orf42Q8N5U0 333 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 RNASE8Q8TDE3 154 aaKnown RBP10.23□□□□□ -0.77
VPS16-202ENST00000380445 SLC35E1Q96K37 410 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 TMEM204Q9BSN7 226 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 C19orf24Q9BVV8 132 aa10.23□□□□□ -0.77
VPS16-202ENST00000380445 IGFBP2P18065 325 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 RPL23P62829 140 aaKnown RBP10.22□□□□□ -0.77
VPS16-202ENST00000380445 PRR20EP86478 221 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 PRR20CP86479 221 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 PRR20DP86480 221 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 PRR20BP86481 221 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 PRR20AP86496 221 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 HLA-DRB5Q30154 266 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
VPS16-202ENST00000380445 TLN1Q9Y490 2541 aaKnown RBP10.22□□□□□ -0.77
VPS16-202ENST00000380445 CD69Q07108 199 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 ZNF841Q6ZN19 808 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 OR8B3Q8NGG8 313 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 ANAPC16Q96DE5 110 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 OR8B2Q96RD0 313 aa10.22□□□□□ -0.77
VPS16-202ENST00000380445 TRBV24-1A0A075B6N3 115 aa10.21□□□□□ -0.77
VPS16-202ENST00000380445 IGHV2-26A0A0B4J1V2 119 aa10.21□□□□□ -0.77
VPS16-202ENST00000380445 DIAPH2-AS1Q14236 149 aa10.21□□□□□ -0.77
VPS16-202ENST00000380445 OR10W1Q8NGF6 305 aa10.21□□□□□ -0.77
VPS16-202ENST00000380445 SLC45A2Q9UMX9 530 aa10.21□□□□□ -0.77
VPS16-202ENST00000380445 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.77
VPS16-202ENST00000380445 PPIAL4CA0A0B4J2A2 164 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 LYNX1G3V0Z9 82 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 IGLV2-23P01705 113 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 PPIAL4GP0DN37 164 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 LYNX1P0DP58 116 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 UBE2G2P60604 165 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 TEX38Q6PEX7 206 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 TIMD4Q96H15 378 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 CLEC7AQ9BXN2 247 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 AMMECR1Q9Y4X0 333 aaPredicted RBP10.21□□□□□ -0.78
VPS16-202ENST00000380445 TNCP24821 2201 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 PKDREJQ9NTG1 2253 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 CHD8Q9HCK8 2581 aa10.21□□□□□ -0.78
VPS16-202ENST00000380445 TEX45Q8NA69 505 aa10.2□□□□□ -0.78
VPS16-202ENST00000380445 C8orf46Q8TAG6 207 aa10.2□□□□□ -0.78
VPS16-202ENST00000380445 OR5B12Q96R08 314 aa10.2□□□□□ -0.78
VPS16-202ENST00000380445 SEPSECSQ9HD40 501 aaKnown RBP10.2□□□□□ -0.78
VPS16-202ENST00000380445 ENSAO43768 121 aaKnown RBP10.2□□□□□ -0.78
VPS16-202ENST00000380445 IGLV1-47P01700 117 aa10.2□□□□□ -0.78
VPS16-202ENST00000380445 LINC00869P0C866 280 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms