RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 HARBI1Q96MB7 349 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 NPCDR1Q9BY65 106 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 ACTR3CQ9C0K3 210 aaPredicted RBP15.71■□□□□ 0.11
SSU72-204ENST00000378726 AKAP6Q13023 2319 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 DOPEY1Q5JWR5 2465 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 PPP5D1E7EU14 171 aa15.71■□□□□ 0.1
SSU72-204ENST00000378726 OVOL3O00110 214 aa15.71■□□□□ 0.1
SSU72-204ENST00000378726 GZMBP10144 247 aa15.71■□□□□ 0.1
SSU72-204ENST00000378726 COX7A1P24310 79 aa15.71■□□□□ 0.1
SSU72-204ENST00000378726 HLA-DRB5Q30154 266 aa15.71■□□□□ 0.1
SSU72-204ENST00000378726 NOL4LQ96MY1 436 aaPredicted RBP15.71■□□□□ 0.1
SSU72-204ENST00000378726 A0A1W2PPQ1 181 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 C15orf62A8K5M9 175 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 MBP02144 154 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 PDPNQ86YL7 162 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 Q8N7P7 452 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 OR4C13Q8NGP0 309 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 RNASEH2CQ8TDP1 164 aaKnown RBP15.7■□□□□ 0.1
SSU72-204ENST00000378726 MANBALQ9NQG1 85 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 BET1LQ9NYM9 111 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 PRNDQ9UKY0 176 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 OR51B2Q9Y5P1 312 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 USP9XQ93008 2570 aaPredicted RBP15.7■□□□□ 0.1
SSU72-204ENST00000378726 A8MWP6 167 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 BUB1B-PAK6H3BSN5 160 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 SAA1P0DJI8 122 aaPredicted RBP15.7■□□□□ 0.1
SSU72-204ENST00000378726 MYOD1P15172 320 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 NPPCP23582 126 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 RPP30P78346 268 aaKnown RBP15.7■□□□□ 0.1
SSU72-204ENST00000378726 BEND2Q8NDZ0 799 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 WASHC3Q9Y3C0 194 aa15.7■□□□□ 0.1
SSU72-204ENST00000378726 MC5RP33032 325 aa15.69■□□□□ 0.1
SSU72-204ENST00000378726 PNKDQ8N490 385 aa15.69■□□□□ 0.1
SSU72-204ENST00000378726 OR5T1Q8NG75 326 aa15.69■□□□□ 0.1
SSU72-204ENST00000378726 TACC2O95359 2948 aa15.69■□□□□ 0.1
SSU72-204ENST00000378726 MYO18BQ8IUG5 2567 aa15.69■□□□□ 0.1
SSU72-204ENST00000378726 EPG5Q9HCE0 2579 aa15.69■□□□□ 0.1
SSU72-204ENST00000378726 GOSR1O95249 250 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 PRSS8Q16651 343 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 COA6Q5JTJ3 125 aaKnown RBP15.68■□□□□ 0.1
SSU72-204ENST00000378726 HINT2Q9BX68 163 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 ZNF462Q96JM2 2506 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 ARHGAP32A7KAX9 2087 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 TMEM170AQ8WVE7 144 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 TMEM37Q8WXS4 190 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 FUT9Q9Y231 359 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 INSIG2Q9Y5U4 225 aa15.68■□□□□ 0.1
SSU72-204ENST00000378726 RRHO14718 337 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 ENSAO43768 121 aaKnown RBP15.67■□□□□ 0.1
SSU72-204ENST00000378726 USF2Q15853 346 aaPredicted RBP15.67■□□□□ 0.1
SSU72-204ENST00000378726 VWC2Q2TAL6 325 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 ANAPC16Q96DE5 110 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 NEU1Q99519 415 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 NDUFAF3Q9BU61 184 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 ENY2Q9NPA8 101 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 FKBP11Q9NYL4 201 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 ZNF257Q9Y2Q1 563 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 IGHV3-72A0A0B4J1Y9 119 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 FAM3BP58499 235 aaPredicted RBP15.67■□□□□ 0.1
SSU72-204ENST00000378726 ACTL10Q5JWF8 245 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 ZNF709Q8N972 641 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 OR4P4Q8NGL7 312 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 OR2T10Q8NGZ9 312 aa15.67■□□□□ 0.1
SSU72-204ENST00000378726 TET2Q6N021 2002 aaPredicted RBP15.67■□□□□ 0.1
SSU72-204ENST00000378726 TEX50A0A1B0GTY4 177 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 M0R1W7 72 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 TCAPO15273 167 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 GGCTO75223 188 aaKnown RBP15.66■□□□□ 0.1
SSU72-204ENST00000378726 ZFP36P26651 326 aaKnown RBP15.66■□□□□ 0.1
SSU72-204ENST00000378726 RITA1Q96K30 269 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 SPOCK3Q9BQ16 436 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 C11orf94C9JXX5 98 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 CHRNA7P36544 502 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 PDLIM4P50479 330 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 GCSAMLQ5JQS6 135 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 ZNF664Q8N3J9 261 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 ACY3Q96HD9 319 aa15.66■□□□□ 0.1
SSU72-204ENST00000378726 AMMECR1Q9Y4X0 333 aaPredicted RBP15.66■□□□□ 0.1
SSU72-204ENST00000378726 BTF3P20290 206 aaKnown RBP15.65■□□□□ 0.1
SSU72-204ENST00000378726 CDC34P49427 236 aaPredicted RBP15.65■□□□□ 0.1
SSU72-204ENST00000378726 MOB3BQ86TA1 216 aa15.65■□□□□ 0.1
SSU72-204ENST00000378726 BPESC1Q9GZL8 116 aa15.65■□□□□ 0.1
SSU72-204ENST00000378726 AURKAIP1Q9NWT8 199 aaPredicted RBP15.65■□□□□ 0.1
SSU72-204ENST00000378726 IGHV1-3A0A0C4DH29 117 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 IGLV2-23P01705 113 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 IGHV4-39P01824 125 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 PRTN3P24158 256 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 SRP14P37108 136 aaKnown RBP15.64■□□□□ 0.09
SSU72-204ENST00000378726 PRCDQ00LT1 54 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 VSTM2AQ8TAG5 236 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 IGFBPL1Q8WX77 278 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 RPEQ96AT9 228 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 TNCP24821 2201 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 VENTXO95231 258 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 USF1P22415 310 aaPredicted RBP15.64■□□□□ 0.09
SSU72-204ENST00000378726 UBE2G2P60604 165 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 GNB1P62873 340 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 RPL8P62917 257 aaKnown RBP15.64■□□□□ 0.09
SSU72-204ENST00000378726 OR5B3Q8NH48 314 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 COMMD5Q9GZQ3 224 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms