RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 IFI27L2Q9H2X8 130 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 RPP21Q9H633 154 aaKnown RBP10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 FNDC4Q9H6D8 234 aaPredicted RBP10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 SRSF6Q13247 344 aaKnown RBP10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 TEX45Q8NA69 505 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 GATAD1Q8WUU5 269 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 CABIN1Q9Y6J0 2220 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BKO60814 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BJP06899 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BOP23527 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BBP33778 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BDP58876 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BCP62807 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST2H2BEQ16778 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BHQ93079 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BNQ99877 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BMQ99879 126 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 CLEC7AQ9BXN2 247 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 NRN1Q9NPD7 142 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 THADAQ6YHU6 1953 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 NDUFA3O95167 84 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 FMC1Q96HJ9 113 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 ALPK2Q86TB3 2170 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 NPIPB13A6NJU9 1138 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 NPIPB4C9JG80 1138 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 NPIPB11E5RHQ5 1161 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 TDGF1P13385 188 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 GATA4P43694 442 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 OR13A1Q8NGR1 328 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 LYZL4Q96KX0 146 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 GFI1Q99684 422 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 RNASE7Q9H1E1 156 aaKnown RBP10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 GATA2P23769 480 aaPredicted RBP10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 TRAV40A0A0B4J280 105 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 ZNF324BQ6AW86 544 aaPredicted RBP10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 WDR82Q6UXN9 313 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 C10orf126Q8N4M7 172 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 CHRNA10Q9GZZ6 450 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 ABCA4P78363 2273 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 H3BUT2 72 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 CADP27708 2225 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 MALP21145 153 aa10.07□□□□□ -0.8
PCDHA9-201ENST00000378122 DOCK9Q9BZ29 2069 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 FGF16O43320 207 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 TYMSP04818 313 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 Q0VFX4 171 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 ZNF837Q96EG3 531 aaPredicted RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A0A6YYD4 124 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 J3QRE1 110 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 GNG5P63218 68 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 CIRBPQ14011 172 aaKnown RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 HEPN1Q6WQI6 88 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 UCP1P25874 307 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 GFI1BQ5VTD9 330 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 STHQ8IWL8 128 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 LOC285556D6RIA3 1793 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 GPR183P32249 361 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 TCF15Q12870 199 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 GPX4P36969 197 aaPredicted RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 KIR3DL3Q8N743 410 aa10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 TNS1Q9HBL0 1735 aaKnown RBP10.06□□□□□ -0.8
PCDHA9-201ENST00000378122 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 TFF1P04155 84 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 CXCL1P09341 107 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 CCL20P78556 96 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 CD69Q07108 199 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 NEU4Q8WWR8 484 aaPredicted RBP10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 H0YIZ8 118 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 CD55P08174 381 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 NPPCP23582 126 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 ZNF124Q15973 351 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 TMEM8BA6NDV4 472 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 IFNL4K9M1U5 179 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 NDUFA2O43678 99 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 CGB3P0DN86 165 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 PLPPR1Q8TBJ4 325 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 COPS9Q8WXC6 57 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 C1QTNF5Q9BXJ0 243 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms