RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 A0A1B0GUT8 65 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 A0A1W2PRE2 83 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 ANOS1P23352 680 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 ZNF502Q8TBZ5 544 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 NEU1Q99519 415 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 UMODP07911 640 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 PPIAL4GP0DN37 164 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 PCP4P48539 62 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 UCNP55089 124 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 OR1N2Q8NGR9 330 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 C16orf92Q96LL3 132 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 GPR82Q96P67 336 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BLQ99880 126 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 TRAV24A0A0B4J272 114 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 FBLL1A6NHQ2 334 aaKnown RBP7.03□□□□□ -1.28
VPS36-201ENST00000378060 NPIPB11E5RHQ5 1161 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 COX6CP09669 75 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 FTH1P19P0C7X4 201 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 AREGP15514 252 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 CFHR1Q03591 330 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 C17orf82Q86X59 251 aaPredicted RBP7.03□□□□□ -1.28
VPS36-201ENST00000378060 HIST3H2BBQ8N257 126 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 KCNS1Q96KK3 526 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 FOXJ2Q9P0K8 574 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 RALYQ9UKM9 306 aaKnown RBP7.03□□□□□ -1.28
VPS36-201ENST00000378060 IGKV1-12A0A0C4DH73 117 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 A1L4Q6 167 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 IGKV1D-12P01611 117 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 CELA3AP09093 270 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
VPS36-201ENST00000378060 TCTAP57738 103 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 QRFPP83859 136 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 TMEM136Q6ZRR5 245 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 NRN1Q9NPD7 142 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 CEP295Q9C0D2 2601 aa7.03□□□□□ -1.28
VPS36-201ENST00000378060 INTS1Q8N201 2190 aaKnown RBP7.02□□□□□ -1.28
VPS36-201ENST00000378060 IGKV3D-15A0A087WSY6 115 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 J3KRW8 73 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 CCL21O00585 134 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 EFNA2O43921 213 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 SERF1AO75920 110 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 NAPSAO96009 420 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 LOXL3P58215 753 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 STPG1Q5TH74 334 aa7.02□□□□□ -1.28
VPS36-201ENST00000378060 LHX2P50458 406 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 NMSQ5H8A3 153 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 UNQ5815/PRO19632Q6UWF5 114 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 ZIC4Q8N9L1 334 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 OR52E5Q8NH55 327 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 FMC1Q96HJ9 113 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 HIST1H4GQ99525 98 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 RPP21Q9H633 154 aaKnown RBP7.02□□□□□ -1.29
VPS36-201ENST00000378060 ELOVL5Q9NYP7 299 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 ABCA1O95477 2261 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 IGKV3-7A0A075B6H7 116 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 OTX1P32242 354 aaPredicted RBP7.02□□□□□ -1.29
VPS36-201ENST00000378060 CX3CL1P78423 397 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 MUC15Q8N387 334 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 NABP1Q96AH0 204 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
VPS36-201ENST00000378060 SGK494Q96LW2 274 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 LINC00312Q9Y6C7 94 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 IGHV2OR16-5A0A0B4J2B6 119 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 NUDT3O95989 172 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 IL4P05112 153 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 RELQ04864 619 aaPredicted RBP7.02□□□□□ -1.29
VPS36-201ENST00000378060 ACSF3Q4G176 576 aaPredicted RBP7.02□□□□□ -1.29
VPS36-201ENST00000378060 MIR17HGQ75NE6 70 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 TMEM171Q8WVE6 324 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 GNB1LQ9BYB4 327 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 WNT10AQ9GZT5 417 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 LAMTOR2Q9Y2Q5 125 aa7.02□□□□□ -1.29
VPS36-201ENST00000378060 A0A0G2JMM0 328 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 A0A1W2PPB8 328 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 A0A1W2PRS3 328 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 C15orf61A6NNL5 157 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 KIR3DP1A8MWS1 328 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 B9A039 149 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 UPK2O00526 184 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 REG1AP05451 166 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 C1QTNF9P0C862 333 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 CD59P13987 128 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 ARF6P62330 175 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 FOXL1Q12952 345 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 TEX38Q6PEX7 206 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 CIARTQ8N365 385 aaPredicted RBP7.01□□□□□ -1.29
VPS36-201ENST00000378060 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 RNF115Q9Y4L5 304 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 KIAA2026Q5HYC2 2103 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 LOC107984156A0A0G2JMH3 177 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 IGHV1-69-2A0A0G2JMI3 117 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 SS18L1O75177 396 aaPredicted RBP7.01□□□□□ -1.29
VPS36-201ENST00000378060 MOSP00540 346 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 DNLZQ5SXM8 178 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 MBNL2Q5VZF2 373 aaKnown RBP7.01□□□□□ -1.29
VPS36-201ENST00000378060 Q6ZS49 121 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 ARL17AQ8IVW1 177 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms