RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 OCIAD2Q56VL3 154 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 MORN5Q5VZ52 161 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 NANOS1Q8WY41 292 aaKnown RBP13.02□□□□□ -0.33
CKAP4-201ENST00000378026 TAX1BP3O14907 124 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 WISP2O76076 250 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 FABP6P51161 128 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 TBR1Q16650 682 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 OR9G1Q8NH87 305 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 KLF14Q8TD94 323 aaPredicted RBP13.01□□□□□ -0.33
CKAP4-201ENST00000378026 SNRNP40Q96DI7 357 aaKnown RBP13.01□□□□□ -0.33
CKAP4-201ENST00000378026 TMEM70Q9BUB7 260 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 TTTY12Q9BZ98 90 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 C15orf65H3BRN8 121 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 SNAI2O43623 268 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 ARG2P78540 354 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 MRPL49Q13405 166 aaKnown RBP13.01□□□□□ -0.33
CKAP4-201ENST00000378026 TMEM251Q8N6I4 163 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 IGF2BP2-AS1Q96M15 143 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 FAM173AQ9BQD7 235 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 SAP30LQ9HAJ7 183 aa13.01□□□□□ -0.33
CKAP4-201ENST00000378026 AGFG2O95081 481 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 WDR82Q6UXN9 313 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 CD177Q8N6Q3 437 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 DUSP13Q9UII6 198 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 RPH3ALQ9UNE2 315 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 HIGD1CA8MV81 97 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 PYYP10082 97 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 UBE2L3P68036 154 aaKnown RBP13□□□□□ -0.33
CKAP4-201ENST00000378026 LRRC10Q5BKY1 277 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 NUDT10Q8NFP7 164 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 NUDT11Q96G61 164 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 DEFB127Q9H1M4 99 aa13□□□□□ -0.33
CKAP4-201ENST00000378026 IGHV3OR15-7A0A075B7D8 119 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 C15orf61A6NNL5 157 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 ADH4P08319 380 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 HSPE1P61604 102 aaKnown RBP12.99□□□□□ -0.33
CKAP4-201ENST00000378026 LHFPL4Q7Z7J7 247 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 GSX1Q9H4S2 264 aaPredicted RBP12.99□□□□□ -0.33
CKAP4-201ENST00000378026 MRPS17Q9Y2R5 130 aaKnown RBP12.99□□□□□ -0.33
CKAP4-201ENST00000378026 A0A087X0K7 114 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 TIMM8AO60220 97 aaPredicted RBP12.99□□□□□ -0.33
CKAP4-201ENST00000378026 TCF24Q7RTU0 167 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 SPEM1Q8N4L4 309 aa12.99□□□□□ -0.33
CKAP4-201ENST00000378026 SLC25A10Q9UBX3 287 aaPredicted RBP12.99□□□□□ -0.33
CKAP4-201ENST00000378026 PTPRBP23467 1997 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 ABHD17BQ5VST6 288 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 ZNF137PP52743 207 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 ZNF138P52744 262 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 GNG5P63218 68 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 ZNRF1Q8ND25 227 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 LRRC29Q8WV35 223 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 URB1-AS1Q96HZ7 61 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
CKAP4-201ENST00000378026 LOC400499M0QZD8 3231 aa12.98□□□□□ -0.33
CKAP4-201ENST00000378026 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.97□□□□□ -0.33
CKAP4-201ENST00000378026 IQCF6A8MYZ5 107 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 PATE3B3GLJ2 98 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 PLAUP00749 431 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 PRDX2P32119 198 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 CXCL12P48061 93 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 TAS2R45P59539 299 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 SSX8Q7RTT4 187 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 CT55Q8WUE5 264 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 DCHS1Q96JQ0 3298 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 J3QR06 171 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 PPBPP02775 128 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 SLC25A34Q6PIV7 304 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 MED13Q9UHV7 2174 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 C8orf88P0DMB2 117 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 RIPPLY3P57055 190 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 SMIM21Q3B7S5 101 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 OR4S2Q8NH73 311 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 CORO2AQ92828 525 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 OR2V2Q96R30 315 aa12.97□□□□□ -0.33
CKAP4-201ENST00000378026 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.33
CKAP4-201ENST00000378026 PSG9Q00887 426 aa12.96□□□□□ -0.33
CKAP4-201ENST00000378026 GABRA6Q16445 453 aa12.96□□□□□ -0.33
CKAP4-201ENST00000378026 FAM90A9PA6NNJ1 464 aa12.96□□□□□ -0.34
CKAP4-201ENST00000378026 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.34
CKAP4-201ENST00000378026 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.34
CKAP4-201ENST00000378026 IDI2-AS1Q9NZ38 188 aa12.96□□□□□ -0.34
CKAP4-201ENST00000378026 KLF13Q9Y2Y9 288 aaPredicted RBP12.96□□□□□ -0.34
CKAP4-201ENST00000378026 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 LEPROTL1O95214 131 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 CD46P15529 392 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 RHOGP84095 191 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 CXXC4Q9H2H0 198 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 TRAV8-6A0A0B4J262 113 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 A0A1W2PRE2 83 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 PCNX2A6NKB5 2137 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 C21orf140B9A014 251 aa12.95□□□□□ -0.34
CKAP4-201ENST00000378026 HSBP1L1C9JCN9 74 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms