RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 FOXL1Q12952 345 aa16.58■□□□□ 0.24
CBWD3-202ENST00000377342 AWAT1Q58HT5 328 aa16.58■□□□□ 0.24
CBWD3-202ENST00000377342 MYOZ3Q8TDC0 251 aa16.58■□□□□ 0.24
CBWD3-202ENST00000377342 STRAPQ9Y3F4 350 aaKnown RBP16.58■□□□□ 0.24
CBWD3-202ENST00000377342 FAM24AA6NFZ4 105 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 PRSS46E5RG02 174 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 OR2J3O76001 311 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 ELANEP08246 267 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 P2RY1P47900 373 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 CAV2P51636 162 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 RHOGP84095 191 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 HIST2H2BDQ6DRA6 164 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 SLC25A24Q6NUK1 477 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 HAPLN4Q86UW8 402 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 OR1L6Q8NGR2 347 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 THAP6Q8TBB0 222 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 WFDC12Q8WWY7 111 aa16.57■□□□□ 0.24
CBWD3-202ENST00000377342 K7EIM0 57 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 NDUFB8O95169 186 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 TRGV3P03979 118 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 RPLP1P05386 114 aaKnown RBP16.56■□□□□ 0.24
CBWD3-202ENST00000377342 METTL15P1P0C7V9 234 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 SLC25A4P12235 298 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 RAB9AP51151 201 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 SUB1P53999 127 aaKnown RBP eCLIP16.56■□□□□ 0.24
CBWD3-202ENST00000377342 TPPP2P59282 170 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 KIAA0141Q14154 515 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-202ENST00000377342 COMMD1Q8N668 190 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 DCUN1D4Q92564 292 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 MISP3Q96FF7 219 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 FNDC4Q9H6D8 234 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-202ENST00000377342 SLA2Q9H6Q3 261 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 OR8U8P0C7N1 319 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 ATP5IP56385 69 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-202ENST00000377342 TMEM252Q8N6L7 170 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 OR11H4Q8NGC9 324 aa16.56■□□□□ 0.24
CBWD3-202ENST00000377342 PAIP2BQ9ULR5 123 aaKnown RBP16.56■□□□□ 0.24
CBWD3-202ENST00000377342 I3L2K1 104 aa16.55■□□□□ 0.24
CBWD3-202ENST00000377342 CD28P10747 220 aa16.55■□□□□ 0.24
CBWD3-202ENST00000377342 HIST1H1BP16401 226 aaKnown RBP16.55■□□□□ 0.24
CBWD3-202ENST00000377342 RPP30P78346 268 aaKnown RBP16.55■□□□□ 0.24
CBWD3-202ENST00000377342 ARL16Q0P5N6 197 aa16.55■□□□□ 0.24
CBWD3-202ENST00000377342 NECAP1Q8NC96 275 aa16.55■□□□□ 0.24
CBWD3-202ENST00000377342 OR4X2Q8NGF9 303 aa16.55■□□□□ 0.24
CBWD3-202ENST00000377342 FBXL7Q9UJT9 491 aa16.55■□□□□ 0.24
CBWD3-202ENST00000377342 STAB1Q9NY15 2570 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 FXYD6-FXYD2A0A087WZ82 144 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 MFSD2BA6NFX1 497 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 FAM223BA6NKX1 122 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 C15orf32Q32M92 178 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 ETV3LQ6ZN32 361 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 FAM223AQ8IWN6 122 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 C11orf44Q8N8P7 122 aa16.54■□□□□ 0.24
CBWD3-202ENST00000377342 RNASEH2CQ8TDP1 164 aaKnown RBP16.54■□□□□ 0.24
CBWD3-202ENST00000377342 PINX1Q96BK5 328 aaKnown RBP16.54■□□□□ 0.24
CBWD3-202ENST00000377342 IGHV3-21A0A0B4J1V1 117 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 CORTO00230 105 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 CST7O76096 145 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 IFNA4P05014 189 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 RAB11AP62491 216 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 EWSR1Q01844 656 aaKnown RBP eCLIP16.53■□□□□ 0.24
CBWD3-202ENST00000377342 NOXA1Q86UR1 476 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 S4R3C0 116 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 RNF222A6NCQ9 220 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 CYB5BO43169 146 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 MT-CO2P00403 227 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 MLANAQ16655 118 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 OR8G2PQ6IF36 304 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 TMEM65Q6PI78 240 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 MRPL36Q9P0J6 103 aaKnown RBP16.53■□□□□ 0.24
CBWD3-202ENST00000377342 TNFSF18Q9UNG2 199 aa16.53■□□□□ 0.24
CBWD3-202ENST00000377342 IGHV3-48P01763 117 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 OPRK1P41145 380 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 SULT1A1P50225 295 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 CD69Q07108 199 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 EXOSC2Q13868 293 aaKnown RBP16.52■□□□□ 0.23
CBWD3-202ENST00000377342 ZNF491Q8N8L2 437 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 TMEM158Q8WZ71 300 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 BSCL2Q96G97 398 aaPredicted RBP16.52■□□□□ 0.23
CBWD3-202ENST00000377342 THYN1Q9P016 225 aa16.52■□□□□ 0.23
CBWD3-202ENST00000377342 C1QBP02746 253 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 RPL12P30050 165 aaKnown RBP16.51■□□□□ 0.23
CBWD3-202ENST00000377342 NHLH2Q02577 135 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 ACOT7LQ6ZUV0 252 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 SCARB1Q8WTV0 552 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 CCDC140Q96MF4 163 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 AQP10Q96PS8 301 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 GNB4Q9HAV0 340 aa16.51■□□□□ 0.23
CBWD3-202ENST00000377342 F8W735 103 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-202ENST00000377342 SLC16A13Q7RTY0 426 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 STX12Q86Y82 276 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 TMEM217Q8N7C4 229 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 USMG5Q96IX5 58 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 CITED2Q99967 270 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-202ENST00000377342 IGHV3-11P01762 117 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 IGHV3-23P01764 117 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 C18orf65Q6ZTR6 163 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 ZNF546Q86UE3 836 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 VN1R17PQ8TDU5 208 aa16.5■□□□□ 0.23
CBWD3-202ENST00000377342 SLC25A31Q9H0C2 315 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms