RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 HLA-DRB1P01911 266 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 PRCDQ00LT1 54 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 C2orf83Q53S99 150 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 WDR25Q64LD2 544 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 MRPL18Q9H0U6 180 aaKnown RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 PEMTQ9UBM1 199 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 COL6A6A6NMZ7 2263 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 TSC2P49815 1807 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 PSMB2P49721 201 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 CD69Q07108 199 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 PVRIGQ6DKI7 326 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 ITLN2Q8WWU7 325 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 MYOD1P15172 320 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 ID3Q02535 119 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 OR1P1Q8NH06 330 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 TRAV40A0A0B4J280 105 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 PSPNO60542 156 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 ATRXP46100 2492 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 DDTP30046 118 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 SRSF9Q13242 221 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 TRBV9A0A0B4J1U6 114 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 IGHV2-26A0A0B4J1V2 119 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 OOSP1A8MZH6 123 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 NBL1P41271 181 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 LRTM2Q8N967 370 aa14.84□□□□□ -0.03
CLSTN1-202ENST00000377298 IGHV3-66A0A0C4DH42 116 aa14.83□□□□□ -0.03
CLSTN1-202ENST00000377298 DIRC3C9JPN6 131 aa14.83□□□□□ -0.03
CLSTN1-202ENST00000377298 IGHV3-11P01762 117 aa14.83□□□□□ -0.03
CLSTN1-202ENST00000377298 GPR82Q96P67 336 aa14.83□□□□□ -0.03
CLSTN1-202ENST00000377298 TICRRQ7Z2Z1 1910 aa14.83□□□□□ -0.03
CLSTN1-202ENST00000377298 IGHV1-8P0DP01 117 aa14.83□□□□□ -0.04
CLSTN1-202ENST00000377298 WNT2P09544 360 aa14.83□□□□□ -0.04
CLSTN1-202ENST00000377298 SELLP14151 372 aa14.83□□□□□ -0.04
CLSTN1-202ENST00000377298 PEX7O00628 323 aa14.83□□□□□ -0.04
CLSTN1-202ENST00000377298 TMEM200BQ69YZ2 307 aa14.83□□□□□ -0.04
CLSTN1-202ENST00000377298 SNRNP200O75643 2136 aaKnown RBP14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 OR9G9P0C7N8 305 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 CD24P25063 80 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 CD177Q8N6Q3 437 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 SPTBN1Q01082 2364 aaKnown RBP14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 WDR81Q562E7 1941 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 NAPSAO96009 420 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 EGR1P18146 543 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 IFITM10A6NMD0 228 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 MINOS1Q5TGZ0 78 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 C8orf46Q8TAG6 207 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 MINOS1-NBL1R4GNA1 71 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 FBLL1A6NHQ2 334 aaKnown RBP14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 B4DSR2 109 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 M0R3E3 92 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 FAM166AQ6J272 317 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 LHFPL1Q86WI0 220 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 RNF126Q9BV68 326 aa14.82□□□□□ -0.04
CLSTN1-202ENST00000377298 DMRTA2Q96SC8 542 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 DPRXA6NFQ7 191 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 ZNF600Q6ZNG1 722 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 DTX1Q86Y01 620 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 C5orf63A6NC05 138 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 RHOGP84095 191 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 MIR17HGQ75NE6 70 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 FAM74A4Q5TZK3 123 aa14.81□□□□□ -0.04
CLSTN1-202ENST00000377298 ZNF324O75467 553 aaPredicted RBP14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 GATA2P23769 480 aaPredicted RBP14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 LY6G6FQ5SQ64 297 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 OR1N2Q8NGR9 330 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 RNF5Q99942 180 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 DOCK8Q8NF50 2099 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 NUDT3O95989 172 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 ADIPOQQ15848 244 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 FMC1Q96HJ9 113 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 NLRC5Q86WI3 1866 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 TRBV6-6A0A0A6YYG2 114 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 CEACAM4O75871 244 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 NEU1Q99519 415 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 HERPUD1Q15011 391 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 ZNF56Q15929 161 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 HSPB9Q9BQS6 159 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 ZNF257Q9Y2Q1 563 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 MOB4Q9Y3A3 225 aa14.8□□□□□ -0.04
CLSTN1-202ENST00000377298 F8VVB4 439 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 F8VWA3 439 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 PIP4P1Q86T03 277 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 RNF125Q96EQ8 232 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 M0R1W7 72 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 LEPROTL1O95214 131 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 GCSHP23434 173 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 HBBP68871 147 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 VMO1Q7Z5L0 202 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 OR4D5Q8NGN0 318 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 IGHV3OR16-8A0A075B7F1 116 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 TCRBV4S1A1TA0A5B7 111 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 COTL1Q14019 142 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 ZNF502Q8TBZ5 544 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 SLC50A1Q9BRV3 221 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 C5orf52A6NGY3 159 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 ASIPP42127 132 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 TAS2R60P59551 318 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 KIR2DL4Q99706 377 aa14.79□□□□□ -0.04
CLSTN1-202ENST00000377298 PTPRDP23468 1912 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 SRIP30626 198 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms