RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
MSH5-201ENST00000375703 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 TRBV9A0A0B4J1U6 114 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 APOA2P02652 100 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 Q0VG73 95 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 MRPL20Q9BYC9 149 aaKnown RBP11.83□□□□□ -0.52
MSH5-201ENST00000375703 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 OSTCQ9NRP0 149 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 FXYD3Q14802 87 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 OR2T6Q8NHC8 308 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 HSPB9Q9BQS6 159 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 NDUFA4L2Q9NRX3 87 aa11.83□□□□□ -0.52
MSH5-201ENST00000375703 YLPM1P49750 1951 aaKnown RBP11.83□□□□□ -0.52
MSH5-201ENST00000375703 CHRNB4P30926 498 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 CX3CL1P78423 397 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 Q6ZS92 163 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 OR5AU1Q8NGC0 362 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 CACNG8Q8WXS5 425 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 NEU1Q99519 415 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 CBLN4Q9NTU7 201 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 NAT8BQ9UHF3 227 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 TRAV5A0A0B4J249 113 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 NKX6-3A6NJ46 265 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 EREGO14944 169 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 MGST1P10620 155 aaKnown RBP11.82□□□□□ -0.52
MSH5-201ENST00000375703 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 G0S2P27469 103 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 CEACAM8P31997 349 aaPredicted RBP11.82□□□□□ -0.52
MSH5-201ENST00000375703 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
MSH5-201ENST00000375703 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 TANC2Q9HCD6 1990 aa11.82□□□□□ -0.52
MSH5-201ENST00000375703 F2Z2F3 143 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 DLL1O00548 723 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 ISLRO14498 428 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 CCL3L1P16619 93 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 REG1BP48304 166 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 PPOXP50336 477 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 WDR73Q6P4I2 378 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 ZCCHC24Q8N2G6 241 aaKnown RBP11.81□□□□□ -0.52
MSH5-201ENST00000375703 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
MSH5-201ENST00000375703 SAMD10Q9BYL1 202 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 RAI1Q7Z5J4 1906 aaPredicted RBP11.81□□□□□ -0.52
MSH5-201ENST00000375703 E7EUB6 86 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 H0YJW9 148 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 SLC35B1P78383 322 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 MEF2CQ06413 473 aaPredicted RBP11.81□□□□□ -0.52
MSH5-201ENST00000375703 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
MSH5-201ENST00000375703 SERTAD4Q9NUC0 356 aa11.81□□□□□ -0.52
MSH5-201ENST00000375703 IGLV2-8P01709 118 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TCL1AP56279 114 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 IBA57Q5T440 356 aaKnown RBP11.8□□□□□ -0.52
MSH5-201ENST00000375703 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 NUP37Q8NFH4 326 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TNCP24821 2201 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 M0R143 59 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
MSH5-201ENST00000375703 MT-ND6P03923 174 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TMEM177Q53S58 311 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TMEM108Q6UXF1 575 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 FAM167A-AS1Q96KT0 104 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 RNF2Q99496 336 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 GNB4Q9HAV0 340 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 DYSFO75923 2080 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
MSH5-201ENST00000375703 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
MSH5-201ENST00000375703 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TPTE2P1Q5T6R2 138 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TMEM200BQ69YZ2 307 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 TMEM136Q6ZRR5 245 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 SLC25A2Q9BXI2 301 aa11.8□□□□□ -0.52
MSH5-201ENST00000375703 PSMB11A5LHX3 300 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 C17orf100A8MU93 164 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
MSH5-201ENST00000375703 COX19Q49B96 90 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 IGF2BP2-AS1Q96M15 143 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 A0A1W2PN81 502 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 K7EM74 188 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 CDKN1AP38936 164 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
MSH5-201ENST00000375703 ZNF705AQ6ZN79 300 aaPredicted RBP11.79□□□□□ -0.52
MSH5-201ENST00000375703 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
MSH5-201ENST00000375703 OR4C13Q8NGP0 309 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 OR10X1Q8NGY0 326 aa11.79□□□□□ -0.52
MSH5-201ENST00000375703 FAM57AQ8TBR7 257 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms