RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 U3KQ87 197 aa13.75□□□□□ -0.21
C6orf48-204ENST00000375639 K7EPK0 472 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 NPY1RP25929 384 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 RAB32Q13637 225 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 KLK9Q2XQG4 91 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 BSXQ3C1V8 233 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 C2orf83Q53S99 150 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 Q6ZNX1 250 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 NOXA1Q86UR1 476 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 PINX1Q96BK5 328 aaKnown RBP13.74□□□□□ -0.21
C6orf48-204ENST00000375639 WDR89Q96FK6 387 aaPredicted RBP13.74□□□□□ -0.21
C6orf48-204ENST00000375639 KLK9Q9UKQ9 250 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
C6orf48-204ENST00000375639 S4R3C0 116 aa13.74□□□□□ -0.21
C6orf48-204ENST00000375639 IGHV3-21A0A0B4J1V1 117 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 ADARB2-AS1A8MUL3 147 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 L7N2F9 121 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 LY86O95711 162 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 VAMP2P63027 116 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 RPP30P78346 268 aaKnown RBP13.73□□□□□ -0.21
C6orf48-204ENST00000375639 LRRC37A5PQ49AS3 106 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 SPANXN5Q5MJ07 72 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 RAB40CQ96S21 281 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 PSENENQ9NZ42 101 aa13.73□□□□□ -0.21
C6orf48-204ENST00000375639 H3BP45 60 aa13.72□□□□□ -0.21
C6orf48-204ENST00000375639 CORTO00230 105 aa13.72□□□□□ -0.21
C6orf48-204ENST00000375639 IGHV3-23P01764 117 aa13.72□□□□□ -0.21
C6orf48-204ENST00000375639 EXOSC2Q13868 293 aaKnown RBP13.72□□□□□ -0.21
C6orf48-204ENST00000375639 TMEM170AQ8WVE7 144 aa13.72□□□□□ -0.21
C6orf48-204ENST00000375639 C4orf3Q8WVX3 66 aa13.72□□□□□ -0.21
C6orf48-204ENST00000375639 SMIM8Q96KF7 97 aa13.72□□□□□ -0.21
C6orf48-204ENST00000375639 MFSD2BA6NFX1 497 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 TMEM50AO95807 157 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 MT-CO2P00403 227 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 IFNA4P05014 189 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
C6orf48-204ENST00000375639 PVALBP20472 110 aaPredicted RBP13.71□□□□□ -0.21
C6orf48-204ENST00000375639 PAX9P55771 341 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
C6orf48-204ENST00000375639 RAB11AP62491 216 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 PVRIGQ6DKI7 326 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 PPP1R1CQ8WVI7 109 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 EEF1AKMT3Q96AZ1 226 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 CXorf58Q96LI9 332 aa13.71□□□□□ -0.21
C6orf48-204ENST00000375639 ZNF436Q9C0F3 470 aaPredicted RBP13.71□□□□□ -0.21
C6orf48-204ENST00000375639 STRAPQ9Y3F4 350 aaKnown RBP13.71□□□□□ -0.21
C6orf48-204ENST00000375639 ANKRD34BA5PLL1 514 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 C15orf62A8K5M9 175 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 I3L2K1 104 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 K7EIM0 57 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 IGHV3-48P01763 117 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 RLN2P04090 185 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 OPRK1P41145 380 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 ZNF343Q6P1L6 599 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
C6orf48-204ENST00000375639 VN1R17PQ8TDU5 208 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 SCARB1Q8WTV0 552 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 OR4C12Q96R67 309 aa13.7□□□□□ -0.22
C6orf48-204ENST00000375639 I3L521 148 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 M0QZ24 198 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 BCAP31P51572 246 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 TAS2R30P59541 319 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 MLANAQ16655 118 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 CLEC19AQ6UXS0 136 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 C21orf62Q9NYP8 219 aa13.69□□□□□ -0.22
C6orf48-204ENST00000375639 TRBV7-1A0A0A6YYK4 115 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 TSC22D2O75157 780 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 DEDDO75618 318 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 RUNX1Q01196 453 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 OR11H1Q8NG94 326 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 OR4F17Q8NGA8 305 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 OR1N2Q8NGR9 330 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 DPF1Q92782 380 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 OR4F4Q96R69 305 aa13.68□□□□□ -0.22
C6orf48-204ENST00000375639 FNDC4Q9H6D8 234 aaPredicted RBP13.68□□□□□ -0.22
C6orf48-204ENST00000375639 PEF1Q9UBV8 284 aaKnown RBP13.68□□□□□ -0.22
C6orf48-204ENST00000375639 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 hCG_2014768A0A024R1R8 64 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 IGHV4OR15-8A0A075B7B6 117 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 A0A087WW49 117 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.67□□□□□ -0.22
C6orf48-204ENST00000375639 RPS10-NUDT3A0A1W2PQS6 291 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 CCL24O00175 119 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 MPC2O95563 127 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 TRBV12-3P01733 135 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
C6orf48-204ENST00000375639 GIPP09681 153 aaPredicted RBP13.67□□□□□ -0.22
C6orf48-204ENST00000375639 CAV2P51636 162 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 MFAP4P55083 255 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 Q56UQ5 140 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 ACSM6Q6P461 480 aa13.67□□□□□ -0.22
C6orf48-204ENST00000375639 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms