RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GCSAMLQ5JQS6 135 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 HSPB7Q9UBY9 170 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 WISP2O76076 250 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 PRB4P10163 310 aaPredicted RBP14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 ZNF343Q6P1L6 599 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 ARPC1AQ92747 370 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 PRO1933Q9H354 126 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 C21orf62Q9NYP8 219 aa14.84□□□□□ -0.03
PTPDC1-202ENST00000375360 ELOA3CA0A087WX78 387 aaPredicted RBP14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 NBEAP1P0C6P0 100 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 TRAV40A0A0B4J280 105 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 IGKV1-6A0A0C4DH72 117 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 NBR2O15453 112 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 NPPCP23582 126 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 DLX1P56177 255 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 KIR3DL3Q8N743 410 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 LRTM2Q8N967 370 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 TRAV30A0A087WSZ9 112 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 ASCL4Q6XD76 172 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 MIR17HGQ75NE6 70 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 SLC25A33Q9BSK2 321 aa14.83□□□□□ -0.04
PTPDC1-202ENST00000375360 A8MWL6 223 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 IGHV1-8P0DP01 117 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 RPL7P18124 248 aaKnown RBP14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 ICAM4Q14773 271 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 GAFA1Q96PS6 74 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 TXNDC17Q9BRA2 123 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 IGKV3-20P01619 116 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 WDR86Q86TI4 376 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 CEACAM8P31997 349 aaPredicted RBP14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 ATP5G3P48201 142 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 RIGQ13278 110 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 SPANXN1Q5VSR9 72 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 ATRAIDQ6UW56 229 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 TGIF2-C20orf24A0A0A6YYL0 155 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 IGHV2-26A0A0B4J1V2 119 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 RBFOX2O43251 390 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 OR5AL1P0C617 328 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 ATP5IP56385 69 aaPredicted RBP14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 LEMD1Q68G75 181 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 NUP37Q8NFH4 326 aa14.82□□□□□ -0.04
PTPDC1-202ENST00000375360 EFNA4P52798 201 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 KIAA1644Q3SXP7 199 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 DUX4L9Q6RFH8 374 aaPredicted RBP14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 A0A0G2JRQ6 117 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 SRSF3P84103 164 aaKnown RBP14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 FAM106AQ4KMX7 169 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 CCL20P78556 96 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 CLEC19AQ6UXS0 136 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 Q6ZRM9 215 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 LHFPL4Q7Z7J7 247 aa14.81□□□□□ -0.04
PTPDC1-202ENST00000375360 TMEM144Q7Z5S9 345 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 TMEM177Q53S58 311 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 NMSQ5H8A3 153 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 A0A1W2PS18 150 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 AGAP20933 346 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 RBPMS2Q6ZRY4 209 aaKnown RBP14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 PRRC2CQ9Y520 2896 aaKnown RBP14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 MGPP08493 103 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 BRD3OSQ6XYD6 125 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 EEF1AKMT3Q96AZ1 226 aa14.8□□□□□ -0.04
PTPDC1-202ENST00000375360 TMEM219Q86XT9 240 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 GGACTQ9BVM4 153 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 VSIRQ9H7M9 311 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 M0R2Z0 102 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 VAMP8Q9BV40 100 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 OR2T8A6NH00 312 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 ANOS1P23352 680 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 CENPWQ5EE01 88 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 BPESC1Q9GZL8 116 aa14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
PTPDC1-202ENST00000375360 ID1P41134 155 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 KLF17Q5JT82 389 aaPredicted RBP14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 ZNF506Q5JVG8 444 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 CACNG8Q8WXS5 425 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 C19orf24Q9BVV8 132 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 APCSP02743 223 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 SRSF7Q16629 238 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 RNF138Q8WVD3 245 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 LIME1Q9H400 295 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 IGHV3OR16-12A0A075B7B8 117 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 TEX50A0A1B0GTY4 177 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 TMEM189A5PLL7 270 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 PRSS1P07477 247 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 FAM169BQ8N8A8 192 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 ZNF383Q8NA42 475 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 OR10J6PQ8NGY7 276 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 SPRY4Q9C004 299 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 LOC389332A0A1B0GUA5 103 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 TMEM250H0YL14 139 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 ISLRO14498 428 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 IQCJQ1A5X6 159 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 PGLYRP4Q96LB8 373 aa14.78□□□□□ -0.04
PTPDC1-202ENST00000375360 SCO2A0A1W2PP80 73 aa14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 OR52E5Q8NH55 327 aa14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 GOLT1BQ9Y3E0 138 aa14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 IGKV1-16P04430 117 aa14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 SRP19P09132 144 aaKnown RBP14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 PRCDQ00LT1 54 aa14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 PACRGQ96M98 296 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms