RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CRIM1Q9NZV1 1036 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 SMIM17P0DL12 118 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 CRYGSP22914 178 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 REG1BP48304 166 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 SEC11AP67812 179 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 OR1F12Q8NHA8 337 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 IL1F10Q8WWZ1 152 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 TMEM45BQ96B21 275 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 BCL3P20749 454 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 FGF12P61328 243 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 ZNF718Q3SXZ3 478 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 TMEM191AQ9H0A3 160 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.05□□□□□ -0.8
C9orf3-203ENST00000375315 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 YTHDF2Q9Y5A9 579 aaKnown RBP10.05□□□□□ -0.8
C9orf3-203ENST00000375315 AKAP6Q13023 2319 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 AGFG2O95081 481 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 GABRA6Q16445 453 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 FAM27BQ5VT28 67 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 NEGR1Q7Z3B1 354 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 RBMXL3Q8N7X1 1067 aaKnown RBP10.05□□□□□ -0.8
C9orf3-203ENST00000375315 C9orf106Q8NAJ2 232 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 ATP6V0BQ99437 205 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
C9orf3-203ENST00000375315 C1RLQ9NZP8 487 aa10.05□□□□□ -0.8
C9orf3-203ENST00000375315 ABCA4P78363 2273 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 TIGITQ495A1 244 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 PDLIM3Q53GG5 364 aaPredicted RBP10.04□□□□□ -0.8
C9orf3-203ENST00000375315 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 hDV102S1A0JD36 115 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 ZG16O60844 167 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 NGFP01138 241 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 GPR183P32249 361 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 PLP1P60201 277 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 OR2T6Q8NHC8 308 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 WFDC12Q8WWY7 111 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 SPSB4Q96A44 273 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 CLCF1Q9UBD9 225 aa10.04□□□□□ -0.8
C9orf3-203ENST00000375315 hCG_38984A0A1B0GV85 526 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 LRRC30A6NM36 301 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 MPDU1O75352 247 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 KLF5Q13887 457 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-203ENST00000375315 FXYD3Q14802 87 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 CFAP161Q6P656 301 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 OR2H1Q9GZK4 316 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 TNFRSF19Q9NS68 423 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 A0A087X0K7 114 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 IZUMO1RA6ND01 250 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 K7EP34 96 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 DNPH1O43598 174 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 AZU1P20160 251 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 GCHFRP30047 84 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 SLAQ13239 276 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 RASL11AQ6T310 242 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 OR10W1Q8NGF6 305 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
C9orf3-203ENST00000375315 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 SERTAD4Q9NUC0 356 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 KALRNO60229 2985 aa10.03□□□□□ -0.8
C9orf3-203ENST00000375315 HELTA6NFD8 242 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 CRXO43186 299 aaPredicted RBP10.02□□□□□ -0.8
C9orf3-203ENST00000375315 OPRK1P41145 380 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 ZNF841Q6ZN19 808 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 SPATA12Q7Z6I5 190 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 DOLPP1Q86YN1 238 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 Q8N7P7 452 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 CLEC5AQ9NY25 188 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 MTCH1Q9NZJ7 389 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 OR1A1Q9P1Q5 309 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 PSG11Q9UQ72 335 aa10.02□□□□□ -0.8
C9orf3-203ENST00000375315 TRBV6-6A0A0A6YYG2 114 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 ISLRO14498 428 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 SYNGR3O43761 229 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 RBMXL2O75526 392 aaKnown RBP10.02□□□□□ -0.81
C9orf3-203ENST00000375315 IGLV2-14P01704 120 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 ZC2HC1AQ96GY0 325 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 TECRQ9NZ01 308 aaKnown RBP10.02□□□□□ -0.81
C9orf3-203ENST00000375315 RALYQ9UKM9 306 aaKnown RBP10.02□□□□□ -0.81
C9orf3-203ENST00000375315 PKD1L2Q7Z442 2459 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 PLCE1Q9P212 2302 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 PPIAL4DF5H284 164 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 RRHO14718 337 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 CGAP01215 116 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 APOA2P02652 100 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 HTR1DP28221 377 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 PQLC2Q6ZP29 291 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 MKXQ8IYA7 352 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 PMCHL2Q9BQD1 86 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 GP6Q9HCN6 339 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 IL36RNQ9UBH0 155 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms