RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR8G2PQ6IF36 304 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 LCN15Q6UWW0 184 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 HEPN1Q6WQI6 88 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 RBMS3Q6XE24 437 aaKnown RBP3.87□□□□□ -1.79
USP48-202ENST00000374730 SSX7Q7RTT5 188 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 RPRMLQ8N4K4 120 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 RPP25LQ8N5L8 163 aaKnown RBP3.87□□□□□ -1.79
USP48-202ENST00000374730 FAM24BQ8N5W8 94 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 ZNF439Q8NDP4 499 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 OR10P1Q8NGE3 313 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 OR4S2Q8NH73 311 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 ITLN1Q8WWA0 313 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 LHX4Q969G2 390 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 ADTRPQ96IZ2 230 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 MS4A10Q96PG2 267 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 ZNF251Q9BRH9 671 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 DCTN5Q9BTE1 182 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GGACTQ9BVM4 153 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 NPCDR1Q9BY65 106 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 VSIRQ9H7M9 311 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 MANBALQ9NQG1 85 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 TMEM242Q9NWH2 141 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GNG13Q9P2W3 67 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 METTL1Q9UBP6 276 aaKnown RBP3.87□□□□□ -1.79
USP48-202ENST00000374730 CLN8Q9UBY8 286 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GVINP1Q7Z2Y8 2422 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 RIF1Q5UIP0 2472 aaKnown RBP3.87□□□□□ -1.79
USP48-202ENST00000374730 GCN1Q92616 2671 aaKnown RBP3.87□□□□□ -1.79
USP48-202ENST00000374730 LAMA5O15230 3695 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 RP1L1Q8IWN7 2480 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 ZFYVE26Q68DK2 2539 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ATMQ13315 3056 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 IGHV3OR15-7A0A075B7D8 119 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 SAA2-SAA4A0A096LPE2 208 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 TRGV10A0A0A0MS01 117 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 KBTBD11-OT1A0A1B0GTJ5 212 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ZFP92A6NM28 416 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ZNF729A6NN14 1252 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 DEFB108AA8MXU0 73 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 PRSS46E5RG02 174 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 TMEM250H0YL14 139 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 MKRN2OSH3BPM6 223 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 M0R1X1 148 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 BMPR1BO00238 502 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 TGOLN2O43493 480 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 FCGR3BO75015 233 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 CYB5R3P00387 301 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 IFNA17P01571 189 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 IGHV1-46P01743 117 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 OPN1MWP04001 364 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 S100A8P05109 93 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 CD55P08174 381 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 SMIM6P0DI80 62 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 OPN1MW2P0DN77 364 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 OPN1MW3P0DN78 364 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 RPL35P42766 123 aaKnown RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 AKR1D1P51857 326 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 RND2P52198 227 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ERVK-16P61578 105 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 RAB11AP62491 216 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 TNFAIP6P98066 277 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 MEF2BQ02080 365 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 TFF3Q07654 80 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ELOBQ15370 118 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 KRTAP24-1Q3LI83 254 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 SPRNQ5BIV9 151 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 FFAR4Q5NUL3 377 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 PRAMEF5Q5TYX0 476 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 WDR25Q64LD2 544 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 CYP2G1PQ6ZSU1 146 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 TCF23Q7RTU1 214 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ZFP82Q8N141 532 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 Q8N7P7 452 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ZNF709Q8N972 641 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ZNRF1Q8ND25 227 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 OR10A7Q8NGE5 316 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 OR13D1Q8NGV5 346 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 OR4A16Q8NH70 328 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 RFESDQ8TAC1 157 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 RAB1CQ92928 201 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ISOC2Q96AB3 205 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 GAFA1Q96PS6 74 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 S1PR3Q99500 378 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 TCEAL7Q9BRU2 100 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ACTR3CQ9C0K3 210 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 KCNIP2Q9NS61 270 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 SLC39A9Q9NUM3 307 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 IDI2-AS1Q9NZ38 188 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 FOXA2Q9Y261 457 aaPredicted RBP3.86□□□□□ -1.79
USP48-202ENST00000374730 ICE1Q9Y2F5 2266 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 ACACAQ13085 2346 aa3.86□□□□□ -1.79
USP48-202ENST00000374730 YLPM1P49750 1951 aaKnown RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 TRBV24-1A0A075B6N3 115 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 SMCO3A2RU48 225 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 TMEM8BA6NDV4 472 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 NKX6-3A6NJ46 265 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms