RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TXNDC17Q9BRA2 123 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM133Q9H2Q1 129 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 SPG11Q96JI7 2443 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 A0A087X0M5 115 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 A0A1B0GX30 115 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 A0A1W2PN81 502 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 TRGC2P03986 189 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 S100A8P05109 93 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 RNASE2P10153 161 aaKnown RBP9.78□□□□□ -0.84
HMGCL-202ENST00000374487 NPPCP23582 126 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 CHRNA7P36544 502 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 GAMTQ14353 236 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 ZNF672Q499Z4 452 aaPredicted RBP9.78□□□□□ -0.84
HMGCL-202ENST00000374487 MOB3BQ86TA1 216 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 NECAP1Q8NC96 275 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM167AQ8TBQ9 72 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 PCGF1Q9BSM1 259 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 ACTL6BO94805 426 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 ZNF137PP52743 207 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 GNB1P62873 340 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 PRR20EP86478 221 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 PRR20CP86479 221 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 PRR20DP86480 221 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 PRR20BP86481 221 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 PRR20AP86496 221 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 VMA21Q3ZAQ7 101 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 FAM78BQ5VT40 261 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 SLC45A2Q9UMX9 530 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 TGOLN2O43493 480 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 CLN5O75503 358 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 GCHFRP30047 84 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 GALR1P47211 349 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 PRRX1P54821 245 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 NDUFA6P56556 154 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 MLANAQ16655 118 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 SPATA31B1PQ5VZV4 182 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 TCEAL7Q9BRU2 100 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 TMEM204Q9BSN7 226 aa9.77□□□□□ -0.85
HMGCL-202ENST00000374487 SLC25A17O43808 307 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 LINC00869P0C866 280 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 OR10J1P30954 320 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 PPOXP50336 477 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
HMGCL-202ENST00000374487 CD69Q07108 199 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 HLA-DRB5Q30154 266 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 C11orf42Q8N5U0 333 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 DERL1Q9BUN8 251 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 ZNF430Q9H8G1 570 aaPredicted RBP9.76□□□□□ -0.85
HMGCL-202ENST00000374487 UBTD1Q9HAC8 227 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 OTOGQ6ZRI0 2925 aa9.76□□□□□ -0.85
HMGCL-202ENST00000374487 IGKV1OR2-108A0A075B7D4 117 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 IGHV3-72A0A0B4J1Y9 119 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 E7EUB6 86 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 FOXH1O75593 365 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 LGALS7P47929 136 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 TNFRSF14Q92956 283 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 ACY3Q96HD9 319 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 SLC35E1Q96K37 410 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 DOK5Q9P104 306 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 CELSR1Q9NYQ6 3014 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 ARFGEF3Q5TH69 2177 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 IGHV2-26A0A0B4J1V2 119 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BKO60814 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 IGLV2-23P01705 113 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BJP06899 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BOP23527 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 GATA2P23769 480 aaPredicted RBP9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BBP33778 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 GPX4P36969 197 aaPredicted RBP9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BDP58876 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BCP62807 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST2H2BEQ16778 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.75□□□□□ -0.85
HMGCL-202ENST00000374487 C10orf55Q5SWW7 151 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 MIR17HGQ75NE6 70 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 LINC01551Q86U37 167 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BHQ93079 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BNQ99877 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 HIST1H2BMQ99879 126 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 AURKAIP1Q9NWT8 199 aaPredicted RBP9.75□□□□□ -0.85
HMGCL-202ENST00000374487 FUT9Q9Y231 359 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 TNCP24821 2201 aa9.75□□□□□ -0.85
HMGCL-202ENST00000374487 PPIAL4CA0A0B4J2A2 164 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
HMGCL-202ENST00000374487 PPIAL4GP0DN37 164 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 PRB3Q04118 309 aaPredicted RBP9.74□□□□□ -0.85
HMGCL-202ENST00000374487 WT1-ASQ06250 92 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 ZNF841Q6ZN19 808 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 OR2T6Q8NHC8 308 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 C19orf24Q9BVV8 132 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 CLEC7AQ9BXN2 247 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 RAB1BQ9H0U4 201 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 YTHDF2Q9Y5A9 579 aaKnown RBP9.74□□□□□ -0.85
HMGCL-202ENST00000374487 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms