RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PNRC2Q9NPJ4 139 aaKnown RBP8.59□□□□□ -1.03
CD28-202ENST00000374481 TRAV8-1A0A0A6YYK1 113 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 IGHV5-51A0A0C4DH38 117 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 FOLR3P41439 243 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 PAX9P55771 341 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 HSPE1P61604 102 aaKnown RBP8.59□□□□□ -1.03
CD28-202ENST00000374481 GTF3C1Q12789 2109 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 NUP35Q8NFH5 326 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 BEX4Q9NWD9 120 aaPredicted RBP8.59□□□□□ -1.03
CD28-202ENST00000374481 GATA2P23769 480 aaPredicted RBP8.59□□□□□ -1.04
CD28-202ENST00000374481 HERV-K104P63124 156 aa8.59□□□□□ -1.04
CD28-202ENST00000374481 CNEP1R1Q8N9A8 125 aa8.59□□□□□ -1.04
CD28-202ENST00000374481 DLX4Q92988 240 aaPredicted RBP8.59□□□□□ -1.04
CD28-202ENST00000374481 GPR82Q96P67 336 aa8.59□□□□□ -1.04
CD28-202ENST00000374481 POLR2AP24928 1970 aaKnown RBP8.58□□□□□ -1.04
CD28-202ENST00000374481 SBF1O95248 1867 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 AHRRA9YTQ3 701 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 OR2H2O95918 312 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 TNFRSF4P43489 277 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 RHOGP84095 191 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 Q6ZRM9 215 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 C1QTNF5Q9BXJ0 243 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 MGAMO43451 1857 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 ATG2BQ96BY7 2078 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 C17orf98A8MV24 154 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
CD28-202ENST00000374481 C2orf83Q53S99 150 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 LCTP09848 1927 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 GREB1Q4ZG55 1949 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 A0A1W2PPC4 97 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 APOBEC3AP31941 199 aaPredicted RBP8.58□□□□□ -1.04
CD28-202ENST00000374481 HOXA4Q00056 320 aaPredicted RBP8.58□□□□□ -1.04
CD28-202ENST00000374481 ARTNQ5T4W7 220 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 PLXNA1Q9UIW2 1896 aa8.58□□□□□ -1.04
CD28-202ENST00000374481 MDC1Q14676 2089 aaKnown RBP8.58□□□□□ -1.04
CD28-202ENST00000374481 SAA2-SAA4A0A096LPE2 208 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 H3BTX0 84 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 MLNRO43193 412 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 IGKV1-5P01602 117 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 RAC3P60763 192 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 LYZL4Q96KX0 146 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 MBNL2Q5VZF2 373 aaKnown RBP8.57□□□□□ -1.04
CD28-202ENST00000374481 PCSK4Q6UW60 755 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 GGTLC1Q9BX51 225 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 LIME1Q9H400 295 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 SLC25A10Q9UBX3 287 aaPredicted RBP8.57□□□□□ -1.04
CD28-202ENST00000374481 CEP290O15078 2479 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 LOC102723996A0A087X1L8 192 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 H3BMG7 143 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 RPL30P62888 115 aaKnown RBP8.57□□□□□ -1.04
CD28-202ENST00000374481 VMA21Q3ZAQ7 101 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 ANXA2RQ3ZCQ2 193 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 RNF115Q9Y4L5 304 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 RALGAPA2Q2PPJ7 1873 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 SRD5A2P31213 254 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 EBLN2Q6P2I7 272 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 OR5AN1Q8NGI8 311 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 OR13C6PQ8NH95 151 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 CT55Q8WUE5 264 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 H1FXQ92522 213 aaKnown RBP8.57□□□□□ -1.04
CD28-202ENST00000374481 CYYR1Q96J86 154 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
CD28-202ENST00000374481 FZR1Q9UM11 496 aa8.57□□□□□ -1.04
CD28-202ENST00000374481 MYOFQ9NZM1 2061 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 PLCE1Q9P212 2302 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 AHCTF1Q8WYP5 2266 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 LRRK1Q38SD2 2015 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 ACP1P24666 158 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 PLAURQ03405 335 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 ZFP36L1Q07352 338 aaKnown RBP8.56□□□□□ -1.04
CD28-202ENST00000374481 SPATA31B1PQ5VZV4 182 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 KIAA2026Q5HYC2 2103 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 AREGP15514 252 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 SPACA3Q8IXA5 215 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 SPEM1Q8N4L4 309 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 OR1L8Q8NGR8 309 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 SPINT1O43278 529 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 LAMTOR5O43504 91 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 ATP5LO75964 103 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 ANOS1P23352 680 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 SH2D6Q7Z4S9 175 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 ZIC4Q8N9L1 334 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 V9GYV3 84 aa8.56□□□□□ -1.04
CD28-202ENST00000374481 IGKV1-12A0A0C4DH73 117 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 C9orf172C9J069 976 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 F2RL2O00254 374 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
CD28-202ENST00000374481 IGKV1D-12P01611 117 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
CD28-202ENST00000374481 KLRB1Q12918 225 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 VWC2Q2TAL6 325 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 GOLT1AQ6ZVE7 132 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 MMP17Q9ULZ9 603 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 TRAV8-4A0A0B4J246 113 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms