RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CTRB1P17538 263 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 RAB5CP51148 216 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 OR1P1Q8NH06 330 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 RNASEH2CQ8TDP1 164 aaKnown RBP12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 NPVFQ9HCQ7 196 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 FAM96BQ9Y3D0 163 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 F11RQ9Y624 299 aaKnown RBP12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 TLN2Q9Y4G6 2542 aa12.4□□□□□ -0.42
NIPAL3-204ENST00000374399 SMCO3A2RU48 225 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 A6NDX4 124 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 UMAD1C9J7I0 102 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 TRIM77I1YAP6 450 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 CRYGCP07315 174 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 HSD17B13Q7Z5P4 300 aaPredicted RBP12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 OR2T6Q8NHC8 308 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 ARPC1AQ92747 370 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 SLC25A33Q9BSK2 321 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 RPRMQ9NS64 109 aa12.4□□□□□ -0.43
NIPAL3-204ENST00000374399 LINC01548A6NM66 108 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 H3BUX3 64 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 GPX4P36969 197 aaPredicted RBP12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 BPIFB3P59826 476 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 SERF2P84101 59 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 ZNF726P1Q15940 193 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 AANATQ16613 207 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 SLC16A13Q7RTY0 426 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 C22orf15Q8WYQ4 148 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
NIPAL3-204ENST00000374399 SMAD7O15105 426 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 IGHV3-48P01763 117 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 CAMLGP49069 296 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 SUB1P53999 127 aaKnown RBP eCLIP12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 SSX7Q7RTT5 188 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 TMEM144Q7Z5S9 345 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 MRPL41Q8IXM3 137 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 FAM213BQ8TBF2 198 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 WNT10AQ9GZT5 417 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 HRH4Q9H3N8 390 aa12.38□□□□□ -0.43
NIPAL3-204ENST00000374399 ACANP16112 2415 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 MPDU1O75352 247 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 PRH1P02810 166 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 RAB2AP61019 212 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 LY6EQ16553 131 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 NANPQ8TBE9 248 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 RASL11BQ9BPW5 248 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 MYO9AB2RTY4 2548 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 AGPAT2O15120 278 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 YIF1AO95070 293 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 ELLP55199 621 aaPredicted RBP12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 TEPPQ6URK8 271 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 RPP25LQ8N5L8 163 aaKnown RBP12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 TTC9CQ8N5M4 171 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 ABHD5Q8WTS1 349 aa12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
NIPAL3-204ENST00000374399 IGKV1D-37A0A075B6S9 117 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 I3L2K1 104 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 OPRK1P41145 380 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 AKR1C1Q04828 323 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 ZNF616Q08AN1 781 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 GCSAMLQ5JQS6 135 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 MIC13Q5XKP0 118 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 DPPA3Q6W0C5 159 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 LFNGQ8NES3 379 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 MISP3Q96FF7 219 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 PFDN2Q9UHV9 154 aa12.36□□□□□ -0.43
NIPAL3-204ENST00000374399 ATP6V0E1O15342 81 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 IGHV4-59P01825 116 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 DEFA4P12838 97 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 CCL20P78556 96 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 PRR20EP86478 221 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 PRR20CP86479 221 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 PRR20DP86480 221 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 PRR20BP86481 221 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 PRR20AP86496 221 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 FFAR4Q5NUL3 377 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 MARC2Q969Z3 335 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 RCC1LQ96I51 464 aaKnown RBP12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 SLC45A2Q9UMX9 530 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 OTOGQ6ZRI0 2925 aa12.35□□□□□ -0.43
NIPAL3-204ENST00000374399 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
NIPAL3-204ENST00000374399 K7EIM0 57 aa12.34□□□□□ -0.43
NIPAL3-204ENST00000374399 EIF3GO75821 320 aaKnown RBP eCLIP12.34□□□□□ -0.43
NIPAL3-204ENST00000374399 MT-CO2P00403 227 aa12.34□□□□□ -0.43
NIPAL3-204ENST00000374399 LINC00869P0C866 280 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms