RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 A0A1W2PRF3 423 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 A0A1W2PRM7 423 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 ZNF727A8MUV8 499 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 CXorf1O96002 111 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 AREGP15514 252 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 GATA2P23769 480 aaPredicted RBP15.68■□□□□ 0.1
HDAC1-201ENST00000373548 PAX2Q02962 417 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 BPESC1Q9GZL8 116 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 SDF2L1Q9HCN8 221 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 WNK2Q9Y3S1 2297 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 CRYBA1P05813 215 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 GNB1P62873 340 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 LCN2P80188 198 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 SSBP2P81877 361 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-201ENST00000373548 HABP2Q14520 560 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-201ENST00000373548 C11orf94C9JXX5 98 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 OR2C1O95371 312 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 UBE2G2P60604 165 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 PNRC1Q12796 327 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-201ENST00000373548 PVRIGQ6DKI7 326 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 MRPL41Q8IXM3 137 aaKnown RBP15.67■□□□□ 0.1
HDAC1-201ENST00000373548 ZNF114Q8NC26 417 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 RPUSD4Q96CM3 377 aaKnown RBP15.67■□□□□ 0.1
HDAC1-201ENST00000373548 SMIM7Q9BQ49 75 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 SIRPDQ9H106 197 aa15.67■□□□□ 0.1
HDAC1-201ENST00000373548 MED13LQ71F56 2210 aa15.66■□□□□ 0.1
HDAC1-201ENST00000373548 FCN1O00602 326 aa15.66■□□□□ 0.1
HDAC1-201ENST00000373548 APELAP0DMC3 54 aa15.66■□□□□ 0.1
HDAC1-201ENST00000373548 HOXB4P17483 251 aaPredicted RBP15.66■□□□□ 0.1
HDAC1-201ENST00000373548 MFAP2P55001 183 aa15.66■□□□□ 0.1
HDAC1-201ENST00000373548 LMO4P61968 165 aa15.66■□□□□ 0.1
HDAC1-201ENST00000373548 SPTAN1Q13813 2472 aaKnown RBP15.66■□□□□ 0.1
HDAC1-201ENST00000373548 TEX22C9J3V5 150 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 IGHV3-48P01763 117 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 MT-ND4LP03901 98 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 RNF224P0DH78 156 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 ATP5G3P48201 142 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 ZNF674Q2M3X9 581 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 FAM78BQ5VT40 261 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 FAM24BQ8N5W8 94 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 YPEL4Q96NS1 127 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 PARLQ9H300 379 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 MRPL36Q9P0J6 103 aaKnown RBP15.65■□□□□ 0.1
HDAC1-201ENST00000373548 B4DEV8 164 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 IGHV4-39P01824 125 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 GCHFRP30047 84 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 C19orf35Q6ZS72 473 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 CYP2G1PQ6ZSU1 146 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 MIR17HGQ75NE6 70 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 NPIPB3Q92617 1050 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 MLXQ9UH92 298 aa15.65■□□□□ 0.1
HDAC1-201ENST00000373548 IGHV2-70DA0A0C4DH43 119 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 FOXH1O75593 365 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 NPPCP23582 126 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 PLGLAQ15195 96 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 MMDQ15546 238 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 CST9LP1Q5W188 147 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 SRSF12Q8WXF0 261 aaKnown RBP15.64■□□□□ 0.09
HDAC1-201ENST00000373548 NAT8Q9UHE5 227 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 FUT9Q9Y231 359 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 FOLR2P14207 255 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 CD24P25063 80 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 SSX2Q16385 188 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 FBLN7Q53RD9 439 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 DYNAPQ8N1N2 210 aa15.64■□□□□ 0.09
HDAC1-201ENST00000373548 DOPEY1Q5JWR5 2465 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 IGKV1D-37A0A075B6S9 117 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 CRYGCP07315 174 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 FLI1Q01543 452 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-201ENST00000373548 TMEM241Q24JQ0 296 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 THAP8Q8NA92 274 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 NANPQ8TBE9 248 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 MISP3Q96FF7 219 aa15.63■□□□□ 0.09
HDAC1-201ENST00000373548 NBR2O15453 112 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 GOSR1O95249 250 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 MOSP00540 346 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 KIAA0141Q14154 515 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-201ENST00000373548 OR51G1Q8NGK1 321 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 OR1P1Q8NH06 330 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 EAF1Q96JC9 268 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-201ENST00000373548 PDE6DO43924 150 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 PRB1P04280 392 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 OR5G3P0C626 314 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 RND2P52198 227 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 RUSC1-AS1Q66K80 236 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 NPBQ8NG41 125 aa15.62■□□□□ 0.09
HDAC1-201ENST00000373548 PSMB11A5LHX3 300 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 NDUFA3O95167 84 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 MT-CO2P00403 227 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 RAB5AP20339 215 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 RNF212Q495C1 297 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 MINOS1Q5TGZ0 78 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 TMEM37Q8WXS4 190 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 C19orf24Q9BVV8 132 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 YTHDF2Q9Y5A9 579 aaKnown RBP15.61■□□□□ 0.09
HDAC1-201ENST00000373548 F11RQ9Y624 299 aaKnown RBP15.61■□□□□ 0.09
HDAC1-201ENST00000373548 MINOS1-NBL1R4GNA1 71 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 TCRBV4S1A1TA0A5B7 111 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 PDLIM4P50479 330 aa15.61■□□□□ 0.09
HDAC1-201ENST00000373548 ZNF90Q03938 601 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms