RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 DPM3Q9P2X0 92 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 UFC1Q9Y3C8 167 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 SPAARA0A1B0GVQ0 90 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 OR2J3O76001 311 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 PPBPP02775 128 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 TCF23Q7RTU1 214 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 FABP2P12104 132 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 DLX1P56177 255 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 FHL1Q13642 323 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 RTP5Q14D33 572 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 MORN2Q502X0 79 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 SIGLEC12Q96PQ1 595 aa8.88□□□□□ -0.99
PGK1-201ENST00000373316 TNRC6BQ9UPQ9 1833 aaKnown RBP8.88□□□□□ -0.99
PGK1-201ENST00000373316 ADAMTS20P59510 1910 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 TMEM14EPQ6UXP3 125 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 NUP37Q8NFH4 326 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 GPR61Q9BZJ8 451 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 PAM16Q9Y3D7 125 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 NKX2-8O15522 239 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 SRIP30626 198 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 ANKRD11Q6UB99 2663 aaPredicted RBP8.87□□□□□ -0.99
PGK1-201ENST00000373316 C17orf100A8MU93 164 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 C17orf98A8MV24 154 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 ANOS1P23352 680 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 CCL8P80075 99 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 OR13A1Q8NGR1 328 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 NBEAP1P0C6P0 100 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 PLPPR1Q8TBJ4 325 aa8.87□□□□□ -0.99
PGK1-201ENST00000373316 A0A087WV48 116 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 A0A0G2JLM5 398 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 COX6CP09669 75 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 DLX6P56179 175 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 CACNG7P62955 275 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 SUPT4H1P63272 117 aaKnown RBP8.86□□□□□ -0.99
PGK1-201ENST00000373316 WDR82Q6UXN9 313 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 SCGB1D4Q6XE38 83 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 NEUROG1Q92886 237 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 IGF2RP11717 2491 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 KALRNO60229 2985 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 TCRBV4S1A1TA0A5B7 111 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 SRRM5B3KS81 715 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 CD59P13987 128 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 DUTP33316 252 aaKnown RBP8.86□□□□□ -0.99
PGK1-201ENST00000373316 KHDC1LQ5JSQ8 128 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 DGAT2L7PQ6IED9 249 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 LINC00305Q7Z4B0 112 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 H7C1H1 209 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 ZNHIT1O43257 154 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 SSTR5P35346 364 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 PEF1Q9UBV8 284 aaKnown RBP8.86□□□□□ -0.99
PGK1-201ENST00000373316 TBL2Q9Y4P3 447 aaKnown RBP8.86□□□□□ -0.99
PGK1-201ENST00000373316 A0A1B0GUT8 65 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 NPPCP23582 126 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 CD69Q07108 199 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 C11orf42Q8N5U0 333 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 C16orf92Q96LL3 132 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 ASCL2Q99929 193 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 MIEN1Q9BRT3 115 aa8.86□□□□□ -0.99
PGK1-201ENST00000373316 DPRXA6NFQ7 191 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 SIGLEC5O15389 551 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 WNT2P09544 360 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 STAG3L3P0CL85 134 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 BMPERQ8N8U9 685 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 NPIPB3Q92617 1050 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 DNAJC13O75165 2243 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 CBY3A6NI87 242 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 MOSP00540 346 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 IGHG3P01860 377 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 UNQ5815/PRO19632Q6UWF5 114 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 NDUFAF3Q9BU61 184 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
PGK1-201ENST00000373316 APC2O95996 2303 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 COLCA2A8K830 154 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 ACACAQ13085 2346 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 FXYD3Q14802 87 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 LYPD1Q8N2G4 141 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 UBTD1Q9HAC8 227 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 GSN-AS1Q9NRJ2 163 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 ZNF407Q9C0G0 2248 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 CSN3P07498 182 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 LOXL3P58215 753 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 OR8A1Q8NGG7 326 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
PGK1-201ENST00000373316 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
PGK1-201ENST00000373316 IL17BQ9UHF5 180 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 EFNA2O43921 213 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 CX3CL1P78423 397 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 COLCA1Q6ZS62 124 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 TPRX1Q8N7U7 411 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 MS4A6AQ9H2W1 248 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 NBASA2RRP1 2371 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 SRSF9Q13242 221 aaKnown RBP eCLIP8.84□□□□□ -0.99
PGK1-201ENST00000373316 MUC15Q8N387 334 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 BEND2Q8NDZ0 799 aa8.84□□□□□ -0.99
PGK1-201ENST00000373316 GAGE10A6NGK3 116 aa8.83□□□□□ -1
PGK1-201ENST00000373316 PROB1E7EW31 1015 aa8.83□□□□□ -1
PGK1-201ENST00000373316 CEBPDP49716 269 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms