RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 IFNA17P01571 189 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 ELLP55199 621 aaPredicted RBP17.07■□□□□ 0.32
COL9A2-201ENST00000372736 CD81P60033 236 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 ERHP84090 104 aaKnown RBP17.07■□□□□ 0.32
COL9A2-201ENST00000372736 PYDC2Q56P42 97 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 Q56UQ5 140 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 Q6ZRM9 215 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 FAM219AQ8IW50 185 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 TMEM61Q8N0U2 210 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 MARC2Q969Z3 335 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 ZNF414Q96IQ9 312 aa17.07■□□□□ 0.32
COL9A2-201ENST00000372736 FCGR2BP31994 310 aaPredicted RBP17.06■□□□□ 0.32
COL9A2-201ENST00000372736 S100A5P33763 92 aa17.06■□□□□ 0.32
COL9A2-201ENST00000372736 DHODHQ02127 395 aa17.06■□□□□ 0.32
COL9A2-201ENST00000372736 AARDQ4LEZ3 155 aa17.06■□□□□ 0.32
COL9A2-201ENST00000372736 ZNF57Q68EA5 555 aaPredicted RBP17.06■□□□□ 0.32
COL9A2-201ENST00000372736 BTNL8Q6UX41 500 aa17.06■□□□□ 0.32
COL9A2-201ENST00000372736 CCDC190Q86UF4 302 aa17.06■□□□□ 0.32
COL9A2-201ENST00000372736 SELENOHQ8IZQ5 122 aaKnown RBP17.06■□□□□ 0.32
COL9A2-201ENST00000372736 PDCD10Q9BUL8 212 aa17.06■□□□□ 0.32
COL9A2-201ENST00000372736 NDUFA4O00483 81 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 MT-CO2P00403 227 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 CTSGP08311 255 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 CD7P09564 240 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 ETV6P41212 452 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 GUCA2BQ16661 112 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 RCHY1Q96PM5 261 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 NEURL2Q9BR09 285 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 TM2D3Q9BRN9 247 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 MRPL27Q9P0M9 148 aaKnown RBP17.05■□□□□ 0.32
COL9A2-201ENST00000372736 TMEM56-RWDD3S4R434 201 aa17.05■□□□□ 0.32
COL9A2-201ENST00000372736 IGHV3-48P01763 117 aa17.04■□□□□ 0.32
COL9A2-201ENST00000372736 HOXA1P49639 335 aaPredicted RBP17.04■□□□□ 0.32
COL9A2-201ENST00000372736 TMEM268Q5VZI3 342 aa17.04■□□□□ 0.32
COL9A2-201ENST00000372736 PVRIGQ6DKI7 326 aa17.04■□□□□ 0.32
COL9A2-201ENST00000372736 PINX1Q96BK5 328 aaKnown RBP17.04■□□□□ 0.32
COL9A2-201ENST00000372736 GALNT14Q96FL9 552 aa17.04■□□□□ 0.32
COL9A2-201ENST00000372736 SCGB3A2Q96PL1 93 aa17.04■□□□□ 0.32
COL9A2-201ENST00000372736 DAZ1Q9NQZ3 744 aaKnown RBP17.04■□□□□ 0.32
COL9A2-201ENST00000372736 GAR1Q9NY12 217 aaKnown RBP17.04■□□□□ 0.32
COL9A2-201ENST00000372736 RNASE2P10153 161 aaKnown RBP17.03■□□□□ 0.32
COL9A2-201ENST00000372736 FAUP35544 74 aaKnown RBP17.03■□□□□ 0.32
COL9A2-201ENST00000372736 SNCAP37840 140 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 MFAP4P55083 255 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 SUPT4H1P63272 117 aaKnown RBP17.03■□□□□ 0.32
COL9A2-201ENST00000372736 TMEM187Q14656 261 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 GPR146Q96CH1 333 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 TXN2Q99757 166 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 WFDC10AQ9H1F0 79 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 PRR13Q9NZ81 148 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 CACNG5Q9UF02 275 aa17.03■□□□□ 0.32
COL9A2-201ENST00000372736 IGHV3OR16-8A0A075B7F1 116 aa17.02■□□□□ 0.32
COL9A2-201ENST00000372736 AP3S2P59780 193 aa17.02■□□□□ 0.32
COL9A2-201ENST00000372736 TOMM5Q8N4H5 51 aa17.02■□□□□ 0.32
COL9A2-201ENST00000372736 IL22RA2Q969J5 263 aa17.02■□□□□ 0.32
COL9A2-201ENST00000372736 TUBA4BQ9H853 241 aa17.02■□□□□ 0.32
COL9A2-201ENST00000372736 ZMAT4Q9H898 229 aa17.02■□□□□ 0.32
COL9A2-201ENST00000372736 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.02■□□□□ 0.32
COL9A2-201ENST00000372736 NUPL2O15504 423 aaKnown RBP17.01■□□□□ 0.31
COL9A2-201ENST00000372736 SCAF4O95104 1147 aaKnown RBP17.01■□□□□ 0.31
COL9A2-201ENST00000372736 SPCS3P61009 180 aa17.01■□□□□ 0.31
COL9A2-201ENST00000372736 BSXQ3C1V8 233 aa17.01■□□□□ 0.31
COL9A2-201ENST00000372736 OR52E5Q8NH55 327 aa17.01■□□□□ 0.31
COL9A2-201ENST00000372736 C20orf24Q9BUV8 137 aa17.01■□□□□ 0.31
COL9A2-201ENST00000372736 ENY2Q9NPA8 101 aa17.01■□□□□ 0.31
COL9A2-201ENST00000372736 TRAV25A0A0B4J276 109 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 C15orf62A8K5M9 175 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 AKR1C4P17516 323 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 RELQ04864 619 aaPredicted RBP17■□□□□ 0.31
COL9A2-201ENST00000372736 HAGHQ16775 308 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 DEFB125Q8N687 156 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 SRRQ9GZT4 340 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 KCNIP3Q9Y2W7 256 aa17■□□□□ 0.31
COL9A2-201ENST00000372736 K7EMT4 169 aa16.99■□□□□ 0.31
COL9A2-201ENST00000372736 ZNF207O43670 478 aaKnown RBP16.99■□□□□ 0.31
COL9A2-201ENST00000372736 SUB1P53999 127 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL9A2-201ENST00000372736 SPANXN2Q5MJ10 180 aa16.99■□□□□ 0.31
COL9A2-201ENST00000372736 LINC00322Q6ZN03 302 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-201ENST00000372736 DEDD2Q8WXF8 326 aa16.99■□□□□ 0.31
COL9A2-201ENST00000372736 OR11H12B2RN74 326 aa16.98■□□□□ 0.31
COL9A2-201ENST00000372736 CORTO00230 105 aa16.98■□□□□ 0.31
COL9A2-201ENST00000372736 GNG7O60262 68 aa16.98■□□□□ 0.31
COL9A2-201ENST00000372736 SLC16A13Q7RTY0 426 aa16.98■□□□□ 0.31
COL9A2-201ENST00000372736 OR10C1Q96KK4 312 aa16.98■□□□□ 0.31
COL9A2-201ENST00000372736 FNDC4Q9H6D8 234 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-201ENST00000372736 NBEAL2Q6ZNJ1 2754 aa16.98■□□□□ 0.31
COL9A2-201ENST00000372736 NMSQ5H8A3 153 aa16.97■□□□□ 0.31
COL9A2-201ENST00000372736 RBPMS2Q6ZRY4 209 aaKnown RBP16.97■□□□□ 0.31
COL9A2-201ENST00000372736 DUSP18Q8NEJ0 188 aa16.97■□□□□ 0.31
COL9A2-201ENST00000372736 OR52B4Q8NGK2 314 aa16.97■□□□□ 0.31
COL9A2-201ENST00000372736 SRD5A3Q9H8P0 318 aa16.97■□□□□ 0.31
COL9A2-201ENST00000372736 A0A0B4J2A0 478 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 RBMY1BA6NDE4 496 aaKnown RBP16.96■□□□□ 0.31
COL9A2-201ENST00000372736 RBMY1EA6NEQ0 496 aaKnown RBP16.96■□□□□ 0.31
COL9A2-201ENST00000372736 RBMY1DP0C7P1 496 aaKnown RBP16.96■□□□□ 0.31
COL9A2-201ENST00000372736 SULT1A3P0DMM9 295 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 SULT1A4P0DMN0 295 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 NPBWR1P48145 328 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 LYZL2Q7Z4W2 148 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 TMED4Q7Z7H5 227 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms