RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MALSU1Q96EH3 234 aa14.85□□□□□ -0.03
VEGFA-206ENST00000372077 SLC39A9Q9NUM3 307 aa14.85□□□□□ -0.03
VEGFA-206ENST00000372077 PRRC2AP48634 2157 aaKnown RBP14.85□□□□□ -0.03
VEGFA-206ENST00000372077 PGPEP1LA6NFU8 196 aa14.85□□□□□ -0.03
VEGFA-206ENST00000372077 HPRT1P00492 218 aa14.85□□□□□ -0.03
VEGFA-206ENST00000372077 TPTE2P1Q5T6R2 138 aa14.85□□□□□ -0.03
VEGFA-206ENST00000372077 LSM10Q969L4 123 aaKnown RBP14.85□□□□□ -0.03
VEGFA-206ENST00000372077 A0A1B0GU03 582 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 H0YJW9 148 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 GAMTQ14353 236 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 ZNF506Q5JVG8 444 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 MINOS1Q5TGZ0 78 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 MINOS1-NBL1R4GNA1 71 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 TRGC1P0CF51 173 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 BCL2P10415 239 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 OR4S2Q8NH73 311 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 SLC35D1Q9NTN3 355 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 CENPVL3A0A0U1RRI6 287 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 CEACAM3P40198 252 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 LHFPL4Q7Z7J7 247 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 OR51G1Q8NGK1 321 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 ABHD5Q8WTS1 349 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 RPEQ96AT9 228 aa14.84□□□□□ -0.03
VEGFA-206ENST00000372077 TBL2Q9Y4P3 447 aaKnown RBP14.84□□□□□ -0.03
VEGFA-206ENST00000372077 A0A0U1RQK1 487 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 KHDC3LQ587J8 217 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 FAM210BQ96KR6 192 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 RAB40CQ96S21 281 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 SMIM7Q9BQ49 75 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 C2orf88Q9BSF0 95 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 C7orf69Q9H7B7 122 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 WNK2Q9Y3S1 2297 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 IGHV1-3A0A0C4DH29 117 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 A0A1W2PRD5 423 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 A0A1W2PRF3 423 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 A0A1W2PRM7 423 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 DFFBO76075 338 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 OPN1MWP04001 364 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 P0C879 139 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 OPN1MW2P0DN77 364 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 OPN1MW3P0DN78 364 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 OR4F5Q8NH21 305 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 OR4F4Q96R69 305 aa14.83□□□□□ -0.04
VEGFA-206ENST00000372077 APOA2P02652 100 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 FGF7P21781 194 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 RTL8BQ17RB0 113 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 HECTD1Q9ULT8 2610 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 J3QLI3 93 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 TGFAP01135 160 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 HSPB1P04792 205 aaKnown RBP14.82□□□□□ -0.04
VEGFA-206ENST00000372077 MC5RP33032 325 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 USF2Q15853 346 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-206ENST00000372077 TAF15Q92804 592 aaKnown RBP eCLIP14.82□□□□□ -0.04
VEGFA-206ENST00000372077 WDR61Q9GZS3 305 aaKnown RBP14.82□□□□□ -0.04
VEGFA-206ENST00000372077 PRDM13Q9H4Q3 707 aa14.82□□□□□ -0.04
VEGFA-206ENST00000372077 A0A1W2PPI3 338 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 OOSP1A8MZH6 123 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 SLC25A6P12236 298 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 LGALS4P56470 323 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 PDPNQ86YL7 162 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 R3HDM4Q96D70 268 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 AJUBAQ96IF1 538 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 DDTP30046 118 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 TNFRSF9Q07011 255 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 COTL1Q14019 142 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 C1QL4Q86Z23 238 aa14.81□□□□□ -0.04
VEGFA-206ENST00000372077 IGKV1-16P04430 117 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 MYOD1P15172 320 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 TMEM177Q53S58 311 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 FFAR4Q5NUL3 377 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 DTD1Q8TEA8 209 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 WASHC3Q9Y3C0 194 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 A0A1W2PPQ1 181 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 NPFFO15130 113 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 PAGE4O60829 102 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 AVPP01185 164 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 CHRNA7P36544 502 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 HBG1P69891 147 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 HBG2P69892 147 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 POU2AF1Q16633 256 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 LRRC75BQ2VPJ9 315 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 CIARTQ8N365 385 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-206ENST00000372077 DERL1Q9BUN8 251 aa14.8□□□□□ -0.04
VEGFA-206ENST00000372077 IGHV1-69DA0A0B4J2H0 117 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 MARCH11A6NNE9 402 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 PPP1R2P9O14990 202 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 IGHV1-69P01742 117 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 CD81P60033 236 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 MOB3BQ86TA1 216 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 HINT2Q9BX68 163 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 HILPDAQ9Y5L2 63 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 ITPR2Q14571 2701 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 LBHQ53QV2 105 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-206ENST00000372077 C16orf82Q7Z2V1 217 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 DYNAPQ8N1N2 210 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 OSR1Q8TAX0 266 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-206ENST00000372077 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.79□□□□□ -0.042e-8■■■□□ 14.7
VEGFA-206ENST00000372077 TRAV3A0A0B4J244 114 aa14.79□□□□□ -0.04
VEGFA-206ENST00000372077 HBE1P02100 147 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms