RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 OR5T1Q8NG75 326 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 PARD6GQ9BYG4 376 aaPredicted RBP10.47□□□□□ -0.73
GPC3-201ENST00000370818 MS4A5Q9H3V2 200 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 ZNRD1Q9P1U0 126 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 UBE2L5PA0A1B0GUS4 154 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 CBY3A6NI87 242 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 SERF1AO75920 110 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 CD3EP07766 207 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 KIR2DS2P43631 304 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 PSMB3P49720 205 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 ADORA2A-AS1P86434 159 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 CLEC2AQ6UVW9 174 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 UNQ5815/PRO19632Q6UWF5 114 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 SLC25A48Q6ZT89 311 aaKnown RBP10.46□□□□□ -0.73
GPC3-201ENST00000370818 ZNF738Q8NE65 137 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 OR4F5Q8NH21 305 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 GATAD1Q8WUU5 269 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 PINX1Q96BK5 328 aaKnown RBP10.46□□□□□ -0.73
GPC3-201ENST00000370818 OR4F4Q96R69 305 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 RNF114Q9Y508 228 aa10.46□□□□□ -0.73
GPC3-201ENST00000370818 IGHV2-70DA0A0C4DH43 119 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 IGKV1D-33P01593 117 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 IGKV1-33P01594 117 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 C1QTNF9P0C862 333 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 IGLC2P0DOY2 106 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 IGLC3P0DOY3 106 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 RPS16P62249 146 aaKnown RBP10.46□□□□□ -0.74
GPC3-201ENST00000370818 RELBQ01201 579 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 MEF2CQ06413 473 aaPredicted RBP10.46□□□□□ -0.74
GPC3-201ENST00000370818 TMEM30BQ3MIR4 351 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 TAF15Q92804 592 aaKnown RBP eCLIP10.46□□□□□ -0.741e-6■■□□□ 11.6
GPC3-201ENST00000370818 BTF3L4Q96K17 158 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 TMEM140Q9NV12 185 aa10.46□□□□□ -0.74
GPC3-201ENST00000370818 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 HYPMO75409 117 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 CCL3L1P16619 93 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 SPATA45Q537H7 98 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 TMEM200BQ69YZ2 307 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 OR4S2Q8NH73 311 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 C15orf62A8K5M9 175 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 B9A039 149 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 M0QZ24 198 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 HMGB3O15347 200 aaKnown RBP10.45□□□□□ -0.74
GPC3-201ENST00000370818 NPPCP23582 126 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 THBS3P49746 956 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 UBE2G2P60604 165 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 ERVK-16P61578 105 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
GPC3-201ENST00000370818 Q6ZN92 141 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 SLC24A4Q8NFF2 622 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 RNF2Q99496 336 aa10.45□□□□□ -0.74
GPC3-201ENST00000370818 F6UZH7 168 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 FBLN7Q53RD9 439 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 OR10P1Q8NGE3 313 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 OR52E5Q8NH55 327 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 OR4A16Q8NH70 328 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 ZNF714Q96N38 554 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 TXN2Q99757 166 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 CT45A6P0DMU7 189 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 CT45A5P0DMU8 189 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 CT45A7P0DMV0 189 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 CD99P14209 185 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 HNRNPA3P51991 378 aaKnown RBP10.44□□□□□ -0.74
GPC3-201ENST00000370818 SUMO1P63165 101 aaKnown RBP10.44□□□□□ -0.74
GPC3-201ENST00000370818 FFAR4Q5NUL3 377 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 OR4C5Q8NGB2 326 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 SVIPQ8NHG7 77 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 NBASA2RRP1 2371 aa10.44□□□□□ -0.74
GPC3-201ENST00000370818 IGHV1-69-2A0A0G2JMI3 117 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 CRISP2P16562 243 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 VDAC2P45880 294 aaPredicted RBP10.43□□□□□ -0.74
GPC3-201ENST00000370818 VWC2Q2TAL6 325 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 OR4A47Q6IF82 309 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 SGMS2Q8NHU3 365 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 ADTRPQ96IZ2 230 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 VPS25Q9BRG1 176 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 CSTL1Q9H114 145 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 KAAG1Q9UBP8 84 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 HCFC1P51610 2035 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 NCOR2Q9Y618 2525 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 F2Z2F3 143 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 NDUFB3O43676 98 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 S100A7P31151 101 aa10.43□□□□□ -0.74
GPC3-201ENST00000370818 SEPSECSQ9HD40 501 aaKnown RBP10.43□□□□□ -0.74
GPC3-201ENST00000370818 C15orf61A6NNL5 157 aa10.42□□□□□ -0.74
GPC3-201ENST00000370818 IGKV1-16P04430 117 aa10.42□□□□□ -0.74
GPC3-201ENST00000370818 LOXP28300 417 aaPredicted RBP10.42□□□□□ -0.74
GPC3-201ENST00000370818 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
GPC3-201ENST00000370818 KRTDAPP60985 99 aa10.42□□□□□ -0.74
GPC3-201ENST00000370818 LRRC10Q5BKY1 277 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms