RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
RPF1-202ENST00000370656 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
RPF1-202ENST00000370656 RNASE11Q8TAA1 199 aaKnown RBP11.66□□□□□ -0.54
RPF1-202ENST00000370656 DCUN1D4Q92564 292 aa11.66□□□□□ -0.54
RPF1-202ENST00000370656 FLYWCH2Q96CP2 140 aaKnown RBP11.66□□□□□ -0.54
RPF1-202ENST00000370656 SMIM8Q96KF7 97 aa11.66□□□□□ -0.54
RPF1-202ENST00000370656 HSPB9Q9BQS6 159 aa11.66□□□□□ -0.54
RPF1-202ENST00000370656 LSM5Q9Y4Y9 91 aaKnown RBP11.66□□□□□ -0.54
RPF1-202ENST00000370656 MSGN1A6NI15 193 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 SYNGR2O43760 224 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 MED6O75586 246 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 TMEM50AO95807 157 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 OR9G9P0C7N8 305 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 PVALBP20472 110 aaPredicted RBP11.65□□□□□ -0.54
RPF1-202ENST00000370656 ZNF491Q8N8L2 437 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 OR4A5Q8NH83 315 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 GNB4Q9HAV0 340 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 TMEM14BQ9NUH8 114 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 TMEM140Q9NV12 185 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 WSB1Q9Y6I7 421 aa11.65□□□□□ -0.54
RPF1-202ENST00000370656 UPK2O00526 184 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 SCGB1D2O95969 90 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 RPL12P30050 165 aaKnown RBP11.64□□□□□ -0.55
RPF1-202ENST00000370656 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
RPF1-202ENST00000370656 F2RL1P55085 397 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 OR4A47Q6IF82 309 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 OR5B12Q96R08 314 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 ARL6Q9H0F7 186 aa11.64□□□□□ -0.55
RPF1-202ENST00000370656 LYRM2Q9NU23 88 aaPredicted RBP11.64□□□□□ -0.55
RPF1-202ENST00000370656 FOXA2Q9Y261 457 aaPredicted RBP11.64□□□□□ -0.55
RPF1-202ENST00000370656 C15orf61A6NNL5 157 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 TAAR5O14804 337 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 BCL2L11O43521 198 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 CRYGBP07316 175 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 SPCS3P61009 180 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 UBE2KP61086 200 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 GNB1P62873 340 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 SLC51BQ86UW2 128 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 KLK15Q9H2R5 256 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 CYTL1Q9NRR1 136 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 ZNF257Q9Y2Q1 563 aa11.63□□□□□ -0.55
RPF1-202ENST00000370656 TRAV3A0A0B4J244 114 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 SHOXO15266 292 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 TSC22D2O75157 780 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 PPIFP30405 207 aaKnown RBP11.62□□□□□ -0.55
RPF1-202ENST00000370656 RAB9AP51151 201 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
RPF1-202ENST00000370656 KIAA0141Q14154 515 aaPredicted RBP11.62□□□□□ -0.55
RPF1-202ENST00000370656 MMDQ15546 238 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 TMEM252Q8N6L7 170 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 OR4A16Q8NH70 328 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 VSTM2AQ8TAG5 236 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
RPF1-202ENST00000370656 SLC25A31Q9H0C2 315 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 MAGT1Q9H0U3 335 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 RBKSQ9H477 322 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 PRNDQ9UKY0 176 aa11.62□□□□□ -0.55
RPF1-202ENST00000370656 HYDINQ4G0P3 5121 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 LINC01619G3V211 115 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 H7C2Y5 167 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 WRBO00258 174 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 SSSCA1O60232 199 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 JTBO76095 146 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 KBTBD11O94819 623 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 SPDEFO95238 335 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 SAA1P0DJI8 122 aaPredicted RBP11.61□□□□□ -0.55
RPF1-202ENST00000370656 BAXQ07812 192 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 MRGPRG-AS1Q2M3A8 158 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 TEX261Q6UWH6 196 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 SSX9Q7RTT3 188 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 DLX4Q92988 240 aaPredicted RBP11.61□□□□□ -0.55
RPF1-202ENST00000370656 HARBI1Q96MB7 349 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 OR4C12Q96R67 309 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 ARPC5LQ9BPX5 153 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 QTRT1Q9BXR0 403 aaKnown RBP11.61□□□□□ -0.55
RPF1-202ENST00000370656 EDA2RQ9HAV5 297 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 PARP11Q9NR21 331 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 U3KQ87 197 aa11.61□□□□□ -0.55
RPF1-202ENST00000370656 TRAV41A0A0B4J266 112 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 KANTRA0A1W2PQU2 76 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 G3V318 75 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 RPS16P62249 146 aaKnown RBP11.6□□□□□ -0.55
RPF1-202ENST00000370656 VAMP2P63027 116 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 ACSM6Q6P461 480 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 ZNF767PQ75MW2 155 aa11.6□□□□□ -0.55
RPF1-202ENST00000370656 RITA1Q96K30 269 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms